Structural Basis of Substrate Recognition by Aldehyde Dehydrogenase 7A1.

Luo M, Tanner JJ, Biochemistry 54(35):5513-22 (2015) Europe PMC

SASDCH2 – Aldehyde dehydrogenase 7A1

Aldehyde dehydrogenase 7A1 (Alpha-aminoadipic semialdehyde dehydrogenase)
MWexperimental 222 kDa
MWexpected 222 kDa
VPorod 270 nm3
log I(s) 8.53×102 8.53×101 8.53×100 8.53×10-1
Aldehyde dehydrogenase 7A1 (Alpha-aminoadipic semialdehyde dehydrogenase) small angle scattering data  s, nm-1
ln I(s)
Aldehyde dehydrogenase 7A1 (Alpha-aminoadipic semialdehyde dehydrogenase) Guinier plot ln 8.53×102 Rg: 3.8 nm 0 (3.8 nm)-2 s2
(sRg)2I(s)/I(0)
Aldehyde dehydrogenase 7A1 (Alpha-aminoadipic semialdehyde dehydrogenase) Kratky plot 1.104 0 3 sRg
p(r)
Aldehyde dehydrogenase 7A1 (Alpha-aminoadipic semialdehyde dehydrogenase) pair distance distribution function Rg: 3.7 nm 0 Dmax: 11.5 nm

Data validation


Fits and models


log I(s)
 s, nm-1
Aldehyde dehydrogenase 7A1 (Alpha-aminoadipic semialdehyde dehydrogenase) NONE model

Synchrotron SAXS data from solutions of Aldehyde dehydrogenase 7A1 in 50 mM Tris, 5% glycerol, 0.5 mM tris(3-hydroxypropyl)phosphine, 50 mM NaCl, pH 7.8 were collected on the 12.3.1 (SIBYLS) camera on the storage ring Advanced Light Source (ALS) (Berkeley, CA, USA) via the mail-in program. Prior to data collection, an ALDH7A1 sample was passed through a Superdex 200 size exclusion column. Scattering intensities were measured at three nominal protein concentrations using exposure times of 0.5, 1.0, 3.0, and 6.0 s. Scattering curves collected from the protein samples were corrected for background scattering using intensity data collected from the Superdex 200 column effluent. Composite scattering curves for each protein concentration were generated with PRIMUS by scaling and merging the background-corrected high-s region from the 3 s exposure with the low-s region from the 0.5 or 1.0 s exposure.

The FoXS fits have χ values of 1.5 for the tetramer, 12.4 for the dimer, and 1.2 for the 96%/4% tetramer/dimer ensemble.

Aldehyde dehydrogenase 7A1 (Alpha-aminoadipic semialdehyde dehydrogenase) (ALDH7A1)
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Tetramer
Mon. MW   55.6 kDa
 
UniProt   P49419-2
Sequence   FASTA
 
PDB ID   4ZUK