Crystal Structure of Aldehyde Dehydrogenase 16 Reveals Trans-Hierarchical Structural Similarity and a New Dimer.

Liu LK, Tanner JJ, J Mol Biol (2018) Europe PMC

SASDEA7 – Aldehyde dehydrogenase family 16 member A1 from Homo sapiens (HsALDH16A1): 3.2 mg/ml

Aldehyde dehydrogenase family 16 member A1 from Homo sapiens
MWexperimental 170 kDa
MWexpected 171 kDa
VPorod 237 nm3
log I(s) 5.00×102 5.00×101 5.00×100 5.00×10-1
Aldehyde dehydrogenase family 16 member A1 from Homo sapiens small angle scattering data  s, nm-1
ln I(s)
Aldehyde dehydrogenase family 16 member A1 from Homo sapiens Guinier plot ln 5.00×102 Rg: 3.8 nm 0 (3.8 nm)-2 s2
(sRg)2I(s)/I(0)
Aldehyde dehydrogenase family 16 member A1 from Homo sapiens Kratky plot 1.104 0 3 sRg
p(r)
Aldehyde dehydrogenase family 16 member A1 from Homo sapiens pair distance distribution function Rg: 3.8 nm 0 Dmax: 11.5 nm

Data validation


Fits and models


log I(s)
 s, nm-1
Aldehyde dehydrogenase family 16 member A1 from Homo sapiens PYMOL model

Synchrotron SAXS data from solutions of aldehyde dehydrogenase family 16 member A1 (HsALDH16A1) in 20 mM Tris-HCl, 100 mM NaCl, 2.0% glycerol, 0.5 mM Tris(3-hydroxypropyl)phosphine, pH 8 were collected on the 12.3.1 (SIBYLS) beam line at the Advanced Light Source (ALS; Berkeley, CA, USA) using a Pilatus3 X 2M detector at a sample-detector distance of 1.5 m and at a wavelength of λ = 0.127 nm (l(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). One solute concentration of 3.20 mg/ml was measured at 10°C. 32 successive 0.300 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

Storage temperature = UNKNOWN

Aldehyde dehydrogenase family 16 member A1 from Homo sapiens (HsALDH16A1)
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Dimer
Mon. MW   85.4 kDa
 
UniProt   Q8IZ83
Sequence   FASTA