Structural Basis for Antigen Recognition by Transglutaminase 2-specific Autoantibodies in Celiac Disease.

Chen X, Hnida K, Graewert MA, Andersen JT, Iversen R, Tuukkanen A, Svergun D, Sollid LM, J Biol Chem 290(35):21365-75 (2015) Europe PMC

SASDA28 – anti-TG2 antibody (679 14 E06)

anti-TG2 antibody (679 14 E06)
MWI(0) 48 kDa
MWexpected 48 kDa
VPorod 58 nm3
log I(s) 1.15×103 1.15×102 1.15×101 1.15×100
anti-TG2 antibody (679 14 E06)  small angle scattering data  s, nm-1
ln I(s)
anti-TG2 antibody (679 14 E06)  Guinier plot ln 1.16×103 Rg: 2.5 nm 0 (2.5 nm)-2 s2
(sRg)2I(s)/I(0)
anti-TG2 antibody (679 14 E06)  Kratky plot 1.104 0 3 sRg
p(r)
anti-TG2 antibody (679 14 E06)  pair distance distribution function Rg: 2.6 nm 0 Dmax: 8.1 nm

Data validation


Fits and models


log I(s)
 s, nm-1
anti-TG2 antibody (679 14 E06)  CRYSOL model

Synchrotron SAXS data from solutions of anti-TG2 antibody (679 14 E06) in 20 mM Tris 150mM NaCl 1mM EDTA, pH 7.2 were collected on the EMBL P12 beam line at the PETRA III storage ring (DESY; Hamburg, Germany) using a Pilatus 2M detector at a sample-detector distance of 3.1 m and at a wavelength of λ = 0.12 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). Solute concentrations ranging between 2 and 16 mg/ml were measured at 10°C. 20 successive 0.050 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted. The low angle data collected at lower concentration were merged with the highest concentration high angle data to yield the final composite scattering curve.

Structural basis for antigen recognition by transglutaminase 2-specific autoantibodies in celiac disease --- SAXS profile of the autoantibody

anti-TG2 antibody (679 14 E06)
Mol. type   Protein
Olig. state   Monomer
Mon. MW   47.6 kDa
Sequence   FASTA