Stable Picodisc Assemblies from Saposin Proteins and Branched Detergents.

Kurgan KW, Chen B, Brown KA, Falco Cobra P, Ye X, Ge Y, Gellman SH, Biochemistry 60(14):1108-1119 (2021) Europe PMC

SASDJN9 – Saposin-A plus MNA C13 (1,2,5,6-tetra-β-D-glucopyranoside-3,4-O-Di-tridecyl-d-mannitol)

Prosaposin (Saposin-A)
1,2,5,6-tetra-β-D-glucopyranoside-3,4-O-Di-tridecyl-d-mannitol
MWexperimental 25 kDa
MWexpected 31 kDa
log I(s) 6.99×10-2 6.99×10-3 6.99×10-4 6.99×10-5
Prosaposin (Saposin-A) 1,2,5,6-tetra-β-D-glucopyranoside-3,4-O-Di-tridecyl-d-mannitol small angle scattering data  s, nm-1
ln I(s)
Prosaposin (Saposin-A) 1,2,5,6-tetra-β-D-glucopyranoside-3,4-O-Di-tridecyl-d-mannitol Guinier plot ln 7.00×10-2 Rg: 2.5 nm 0 (2.5 nm)-2 s2
(sRg)2I(s)/I(0)
Prosaposin (Saposin-A) 1,2,5,6-tetra-β-D-glucopyranoside-3,4-O-Di-tridecyl-d-mannitol Kratky plot 1.104 0 3 sRg
p(r)
Prosaposin (Saposin-A) 1,2,5,6-tetra-β-D-glucopyranoside-3,4-O-Di-tridecyl-d-mannitol pair distance distribution function Rg: 2.4 nm 0 Dmax: 6.7 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of saposin-A plus MNA C13 in 25 mM Tris-HCl, 150 mM NaCl, pH 7.5 were collected on the 12ID-B SAXS/WAXS beam line at the Advanced Photon Source (APS), Argonne National Laboratory (Lemont, IL, USA) using a Pilatus 2M detector at a wavelength of λ = 0.0932 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC) SAS was employed. The SEC parameters were as follows: A 100.00 μl sample at 7 mg/ml was injected at a 0.20 ml/min flow rate onto a GE Superdex 75 Increase 5/150 column at 25°C. 523 successive 1 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

Sample detector distance = UNKNOWN

Prosaposin (Saposin-A) (Sap-A)
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Dimer
Mon. MW   9.5 kDa
Sequence   FASTA
 
1,2,5,6-tetra-β-D-glucopyranoside-3,4-O-Di-tridecyl-d-mannitol (MNA C13)
Mol. type   Other
Olig. state   Decamer
Mon. MW   1.2 kDa
Chemical formula