The Induction Mechanism of the Flavonoid-Responsive Regulator FrrA.

Werner N, Werten S, Hoppen J, Palm GJ, Göttfert M, Hinrichs W, FEBS J (2021) Europe PMC

SASDKB6 – Flavonoid-responsive regulator A (FrrA) in the presence of genistein

TetR/AcrR family transcriptional regulator
5,7-dihydroxy-3-(4-hydroxyphenyl)chromen-4-one
MWI(0) 43 kDa
MWexpected 48 kDa
VPorod 96 nm3
log I(s) 7.18×103 7.18×102 7.18×101 7.18×100
TetR/AcrR family transcriptional regulator 5,7-dihydroxy-3-(4-hydroxyphenyl)chromen-4-one small angle scattering data  s, nm-1
ln I(s)
TetR/AcrR family transcriptional regulator 5,7-dihydroxy-3-(4-hydroxyphenyl)chromen-4-one Guinier plot ln 7.18×103 Rg: 3.4 nm 0 (3.4 nm)-2 s2
(sRg)2I(s)/I(0)
TetR/AcrR family transcriptional regulator 5,7-dihydroxy-3-(4-hydroxyphenyl)chromen-4-one Kratky plot 1.104 0 3 sRg
p(r)
TetR/AcrR family transcriptional regulator 5,7-dihydroxy-3-(4-hydroxyphenyl)chromen-4-one pair distance distribution function Rg: 3.1 nm 0 Dmax: 8.7 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of FrrA in 20 mM Na2HPO4, 50 mM NaCl, 50 mM imidazole, 0.08 mM genistein, pH 7.5 were collected on the EMBL P12 beam line at PETRA III (DESY, Hamburg, Germany) using a Pilatus 2M detector at a sample-detector distance of 3.1 m and at a wavelength of λ = 0.124 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). Solute concentrations ranging between 0.9 and 1.9 mg/ml were measured at 10°C. 20 successive 0.050 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted. The low angle data collected at lower concentration were merged with the highest concentration high angle data to yield the final composite scattering curve.

Storage temperature = UNKNOWN

TetR/AcrR family transcriptional regulator (FrrA)
Mol. type   Protein
Organism   Bradyrhizobium diazoefficiens
Olig. state   Dimer
Mon. MW   23.8 kDa
 
UniProt   A0A2A6N3G4 (19-229)
Sequence   FASTA
 
5,7-dihydroxy-3-(4-hydroxyphenyl)chromen-4-one (Genistein)
Mol. type   Other
Olig. state   Monomer
Mon. MW   0.3 kDa
Chemical formula