Pentameric assembly of the Kv2.1 tetramerization domain

Xu Z, Khan S, Schnicker N, Baker S, Acta Crystallographica Section D Structural Biology 78(6):792-802 (2022) DOI

SASDLJ7 – Human potassium voltage-gated (Kv2.1) channel T1 domain at pH8.0

Potassium voltage-gated channel subfamily B member 1
MWexperimental 72 kDa
MWexpected 73 kDa
VPorod 140 nm3
log I(s) 1.65×10-2 1.65×10-3 1.65×10-4 1.65×10-5
Potassium voltage-gated channel subfamily B member 1 small angle scattering data  s, nm-1
ln I(s)
Potassium voltage-gated channel subfamily B member 1 Guinier plot ln 1.65×10-2 Rg: 2.8 nm 0 (2.8 nm)-2 s2
(sRg)2I(s)/I(0)
Potassium voltage-gated channel subfamily B member 1 Kratky plot 1.104 0 3 sRg
p(r)
Potassium voltage-gated channel subfamily B member 1 pair distance distribution function Rg: 2.7 nm 0 Dmax: 8 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of Human potassium voltage-gated channel (Kv2.1) T1 domain in buffer (20 mM Tris-HCl pH 8.0, 150 mM NaCl, 5% glycerol, 0.01% Triton X-100, 10 mM BME) were collected on the BioCAT 18-ID-D beamline at the Advanced Photon Source (APS) (Chicago, IL, USA) using a Pilatus3 X 1M detector (Dectris) at a sample-detector distance of 3.5 m and at a wavelength of λ = 0.1033 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC)-SAXS was employed. The SEC parameters were as follows: A 250 μl sample at 1.5 mg/ml was injected at a 0.50 ml/min flow rate onto a Superdex 200 increase column (GE healthcare) at 22°C. 2400 successive 1 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

Potassium voltage-gated channel subfamily B member 1 (Kv2.1)
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Pentamer
Mon. MW   14.6 kDa
 
UniProt   Q14721 (29-147)
Sequence   FASTA