LARGE1 Processively Polymerizes Matriglycan Using Active Sites on Alternate Protomers

Joseph S, Schnicker N, Xu Z, Yang T, Hopkins J, Watkins M, Chakravarthy S, Davulcu O, Anderson M, Venzke D, Campbell K, SSRN Electronic Journal () DOI

SASDNJ8 – Xylosyl- and glucuronyltransferase LARGE2 (LARGE2dTM) dimer treated with PNGase F enzyme

Xylosyl- and glucuronyltransferase LARGE2
MWexperimental 191 kDa
MWexpected 168 kDa
VPorod 231 nm3
log I(s) 8.01×100 8.01×10-1 8.01×10-2 8.01×10-3
Xylosyl- and glucuronyltransferase LARGE2 small angle scattering data  s, nm-1
ln I(s)
Xylosyl- and glucuronyltransferase LARGE2 Guinier plot ln 8.02×100 Rg: 4.1 nm 0 (4.1 nm)-2 s2
(sRg)2I(s)/I(0)
Xylosyl- and glucuronyltransferase LARGE2 Kratky plot 1.104 0 3 sRg
p(r)
Xylosyl- and glucuronyltransferase LARGE2 pair distance distribution function Rg: 4.2 nm 0 Dmax: 15.9 nm

Data validation


Fits and models


log I(s)
 s, nm-1
Xylosyl- and glucuronyltransferase LARGE2 DAMMIN model

Synchrotron SAXS data from solutions of a secreted form that lacks the transmembrane domain of mouse LARGE xylosyl- and glucuronyltransferase 2 (LARGE1dTM) in buffer (20 mM HEPES pH 7.4, 150 mM NaCl) were collected on the BioCAT 18-ID-D beamline at the Advanced Photon Source (APS) (Chicago, IL, USA) using a Eiger2 XE 9M detector at a sample-detector distance of 3.67 m and at a wavelength of λ = 0.1033 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC)-MALS-SAXS was employed. The SEC parameters were as follows: A 300 μl sample at 4 mg/ml was injected at a 0.6 ml/min flow rate onto a Superdex 200 increase 10/300 GL column (GE healthcare) at 23°C. 2500 successive 1 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

Xylosyl- and glucuronyltransferase LARGE2 (LARGE2)
Mol. type   Protein
Organism   Mus musculus
Olig. state   Dimer
Mon. MW   84.2 kDa
 
UniProt   Q5XPT3 (30-690)
Sequence   FASTA