Design of intrinsically disordered protein variants with diverse structural properties

Pesce F, Bremer A, Tesei G, Hopkins J, Grace C, Mittag T, Lindorff-Larsen K, Science Advances 10(35) (2024) DOI

SASDTM2 – V4 variant of the low complexity domain of hnRNPA1 (Heterogeneous nuclear ribonucleoprotein A1)

V4 variant of the low complexity domain of hnRNPA1
MWexperimental 15 kDa
MWexpected 13 kDa
VPorod 19 nm3
log I(s) 1.32×10-3 1.32×10-4 1.32×10-5 1.32×10-6
V4 variant of the low complexity domain of hnRNPA1 small angle scattering data  s, nm-1
ln I(s)
V4 variant of the low complexity domain of hnRNPA1 Guinier plot ln 1.33×10-3 Rg: 2.4 nm 0 (2.4 nm)-2 s2
(sRg)2I(s)/I(0)
V4 variant of the low complexity domain of hnRNPA1 Kratky plot 1.104 0 3 sRg
p(r)
V4 variant of the low complexity domain of hnRNPA1 pair distance distribution function Rg: 2.6 nm 0 Dmax: 9.9 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of the V4 variant of the low complexity domain of hnRNPA1 in 20 mM HEPES, 150 mM NaCl, 2 mM DTT, pH 7 were collected on the BioCAT 18ID beam line at the Advanced Photon Source (APS), Argonne National Laboratory (Lemont, IL, USA) using a Eiger2 XE 9M (Dectris) detector at a sample-detector distance of 3.7 m and at a wavelength of λ = 0.1033 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC) SAS was employed. The SEC parameters were as follows: A 250.00 μl sample at 2.6 mg/ml was injected at a 0.60 ml/min flow rate onto a GE Superdex 75 Increase 10/300 column at 25°C. 3000 successive 0.500 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

V4 variant of the low complexity domain of hnRNPA1 (V4)
Mol. type   Protein
Olig. state   Monomer
Mon. MW   13.1 kDa
Sequence   FASTA