SARS-CoV-2 N-protein Full Length (N1-419, residues 1-419) oligomerization seen by SAXS

Guillem Hernandez.

SASDTZ5 – SARS-CoV-2 N-protein Full Length (N1-419, amino acids 1-419): 103 µM

Nucleoprotein
MWI(0) 291 kDa
MWexpected 281 kDa
VPorod 764 nm3
log I(s) 5.36×10-1 5.36×10-2 5.36×10-3 5.36×10-4
Nucleoprotein small angle scattering data  s, nm-1
ln I(s)
Nucleoprotein Guinier plot ln 5.36×10-1 Rg: 7.6 nm 0 (7.6 nm)-2 s2
(sRg)2I(s)/I(0)
Nucleoprotein Kratky plot 1.104 0 3 sRg
p(r)
Nucleoprotein pair distance distribution function Rg: 7.6 nm 0 Dmax: 32 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of the SARS-CoV-2 N-protein full length (amino acids 1 to 419) in 100 mM Tris-HCl, 150 mM NaCl, 1 mM EDTA, pH 8 were collected on the B21 beam line at the Diamond Light Source (Didcot, UK) using a EigerX 4M detector at a sample-detector distance of 3.7 m and at a wavelength of λ = 0.0954 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). One solute concentration of 4.80 mg/ml was measured at 10°C. 10 successive 2 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

Nucleoprotein (Nprotein)
Mol. type   Protein
Organism   Severe acute respiratory syndrome coronavirus 2
Olig. state   Hexamer
Mon. MW   46.8 kDa
 
UniProt   P0DTC9 (1-419)
Sequence   FASTA