The disordered C-terminal tail of fungal LPMOs from phytopathogens mediates protein dimerization and impacts plant penetration.

Tamburrini KC, Kodama S, Grisel S, Haon M, Nishiuchi T, Bissaro B, Kubo Y, Longhi S, Berrin JG, Proc Natl Acad Sci U S A 121(13):e2319998121 (2024) Europe PMC

SASDUN3 – Colletotrichum higginsianum Auxiliary Activity Family 9B Lytic Polysaccharide Monooxygenase (AA9B LPMO) monomer

Endoglucanase-4
MWexperimental 46 kDa
MWexpected 33 kDa
VPorod 68 nm3
log I(s) 4.47×10-2 4.47×10-3 4.47×10-4 4.47×10-5
Endoglucanase-4 small angle scattering data  s, nm-1
ln I(s)
Endoglucanase-4 Guinier plot ln 4.47×10-2 Rg: 3.9 nm 0 (3.9 nm)-2 s2
(sRg)2I(s)/I(0)
Endoglucanase-4 Kratky plot 1.104 0 3 sRg
p(r)
Endoglucanase-4 pair distance distribution function Rg: 4.1 nm 0 Dmax: 17.0 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of AA9 LPMO in 50 mM MES, 150 mM NaCl, pH 6.5 were collected on the SWING beam line at SOLEIL (Saint-Aubin, France) using a Eiger 4M detector at a sample-detector distance of 2 m and at a wavelength of λ = 0.1033 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC) SAS was employed. The SEC parameters were as follows: A 50.00 μl sample at 4.3 mg/ml was injected at a 0.30 ml/min flow rate onto a Agilent AdvanceBio SEC 300Å, 4.6 x 150 mm column at 20°C. 600 successive 0.990 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

ChAA9B was heterologously expressed in Pichia pastoris. The sample was N-deglycosylated before recording SAXS data, however it was not possible to remove O-glycosylation. The difference between the experimental molecular weight and the expected molecular weight is due to O-glycosylation.

Endoglucanase-4 (AA9 LPMO)
Mol. type   Protein
Organism   Colletotrichum higginsianum (strain IMI 349063)
Olig. state   Monomer
Mon. MW   32.8 kDa
 
UniProt   A0A1B7Y5F6 (22-335)
Sequence   FASTA