The structure and flexibility analysis of the Arabidopsis synaptotagmin 1 reveal the basis of its regulation at membrane contact sites

Benavente J, Siliqi D, Infantes L, Lagartera L, Mills A, Gago F, Ruiz-López N, Botella M, Sánchez-Barrena M, Albert A
Life Science Alliance 4(10):e202101152 (2021 Aug 18)

doi: 10.26508/lsa.202101152
Submitted to SASBDB: 2020 Dec 22
Published in SASBDB:

SASDKF6 – C2AB construct of synaptotagmin-1 (SYT1) with E395-397A mutations at the linker

Synaptotagmin-1 experimental SAS data
CORAL model
Sample: Synaptotagmin-1 monomer, 33 kDa Arabidopsis thaliana protein
Buffer: 50 mM Tris, 50 mM NaCl, pH: 8
Experiment: SAXS data collected at B21, Diamond Light Source on 2020 Jun 11
RgGuinier 3.1 nm
Dmax 12.1 nm
VolumePorod 59 nm3

SASDKG6 – SMP2C2A construct of synaptotagmin-1 (SYT1)

Synaptotagmin-1 (SYT1-SMP2C2A) experimental SAS data
MULTIFOXS model
Sample: Synaptotagmin-1 (SYT1-SMP2C2A) monomer, 72 kDa Escherichia coli protein
Buffer: 20 mM Tris, 100 mM NaCl, 5% glycerol, 2 mM DTT, pH: 8
Experiment: SAXS data collected at B21, Diamond Light Source on 2020 Jun 11
RgGuinier 4.2 nm
Dmax 17.8 nm
VolumePorod 138 nm3

SASDKJ9 – C2AB construct of synaptotagmin-1 (SYT1)

Synaptotagmin-1 experimental SAS data
DAMFILT model
Sample: Synaptotagmin-1 monomer, 33 kDa Arabidopsis thaliana protein
Buffer: 50 mM Tris, 50 mM NaCl, pH: 8
Experiment: SAXS data collected at B21, Diamond Light Source on 2021 Feb 16
RgGuinier 2.8 nm
Dmax 12.6 nm
VolumePorod 50 nm3

SASDKK9 – C2AB construct of synaptotagmin-1 (SYT1) in presence of Ca cations

Synaptotagmin-1 experimental SAS data
MULTIFOXS model
Sample: Synaptotagmin-1 monomer, 33 kDa Arabidopsis thaliana protein
Buffer: 50 mM Tris, 50 mM NaCl, pH: 8
Experiment: SAXS data collected at B21, Diamond Light Source on 2021 Feb 16
RgGuinier 2.9 nm
Dmax 13.8 nm
VolumePorod 54 nm3