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Small-Angle X-ray Scattering data (benchmarking/consensus): EMBL-P12 SAXS beam line, DESY
Clement Blanchet
,
Melissa Graewert
,
Cy M Jeffries
,
Dmitri Svergun
Submitted to SASBDB: 2022 Aug 15
Published in SASBDB:
2022 Sep 21
SASDPF7
– Ribonuclease A SEC-SAXS data (EMBL-P12 bioSAXS beam line at DESY)
Sample:
Ribonuclease pancreatic monomer, 14 kDa
Bos taurus
protein
Buffer:
50 mM HEPES, 150 mM KCl, 3% glycerol, pH: 7.5
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2019 Sep 16
R
g
Guinier
1.5
nm
D
max
4.6
nm
Volume
Porod
16
nm
3
SASDPG7
– Ribonuclease A SEC-WAXS data (EMBL-P12 bioSAXS beam line at DESY)
Sample:
Ribonuclease pancreatic monomer, 14 kDa
Bos taurus
protein
Buffer:
50 mM Tris, 100 mM NaCl, 1% v/v glycerol, pH: 7.5
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2019 Jul 8
R
g
Guinier
1.5
nm
D
max
4.8
nm
Volume
Porod
16
nm
3
SASDPH7
– Urate Oxidase SEC-SAXS data (EMBL-P12 bioSAXS beam line at DESY)
Sample:
Urate Oxidase (Uricase) from Aspergillus flavus tetramer, 137 kDa
Aspergillus flavus
protein
Buffer:
100 mM Tris, 150 mM NaCl, 1 % v/v glycerol, pH: 8
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2019 Sep 15
R
g
Guinier
3.2
nm
D
max
8.8
nm
Volume
Porod
221
nm
3
SASDPJ7
– Urate Oxidase SEC-WAXS data (EMBL-P12 bioSAXS beam line at DESY)
Sample:
Urate Oxidase (Uricase) from Aspergillus flavus tetramer, 137 kDa
Aspergillus flavus
protein
Buffer:
100 mM Tris, 150 mM NaCl, 1 % v/v glycerol, pH: 8
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2019 Jul 8
R
g
Guinier
3.2
nm
D
max
9.0
nm
Volume
Porod
214
nm
3
SASDPK7
– Xylose isomerase SEC-SAXS data (EMBL-P12 bioSAXS beam line at DESY)
Sample:
Xylose isomerase tetramer, 173 kDa
Streptomyces rubiginosus
protein
Buffer:
50 mM Tris, 100 mM NaCl, 1 mM MgCl2, 1 % v/v glycerol, pH: 7.5
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2019 Sep 15
R
g
Guinier
3.2
nm
D
max
14.1
nm
Volume
Porod
228
nm
3
SASDPL7
– Xylose isomerase SEC-WAXS data (EMBL-P12 bioSAXS beam line at DESY)
Sample:
Xylose isomerase tetramer, 173 kDa
Streptomyces rubiginosus
protein
Buffer:
50 mM Tris, 100 mM NaCl, 1 mM MgCl2, 1 % v/v glycerol, pH: 7.5
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2019 Jul 8
R
g
Guinier
3.3
nm
D
max
14.1
nm
Volume
Porod
233
nm
3
SASDPM7
– Xylanase SEC-SAXS data (EMBL-P12 bioSAXS beam line at DESY)
Sample:
Endo-1,4-beta-xylanase monomer, 21 kDa
Trichoderma longibrachiatum
protein
Buffer:
50 mM HEPES, 150 mM KCl, 3% glycerol, pH: 7.5
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2019 Sep 16
R
g
Guinier
1.6
nm
D
max
4.8
nm
Volume
Porod
25
nm
3
SASDPN7
– Xylanase SEC-WAXS data (EMBL-P12 bioSAXS beam line at DESY)
Sample:
Endo-1,4-beta-xylanase monomer, 21 kDa
Trichoderma longibrachiatum
protein
Buffer:
50 mM Tris, 100 mM NaCl, 1% v/v glycerol, pH: 7.5
Experiment:
SAXS data collected at EMBL P12, PETRA III
on 2019 Jul 8
R
g
Guinier
1.6
nm
D
max
4.5
nm
Volume
Porod
24
nm
3