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6 hits found for Horne

SASDFZ3 – Escherichia coli YjhC

Escherichia coli YjhC experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Escherichia coli YjhC dimer, 86 kDa Escherichia coli protein
Buffer: 20 mM Tris, 150 mM NaCl, 0.1 % (w/v) sodium azide, 5 % (v/v) glycerol, pH: 8
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2018 Apr 12
On the structure and function of Escherichia coli YjhC: an oxidoreductase involved in bacterial sialic acid metabolism. Proteins (2019)
Horne CR, Kind L, Davies JS, Dobson RCJ
RgGuinier 3.1 nm
Dmax 10.7 nm
VolumePorod 130 nm3

SASDEA6 – Staphylococcus aureus N-acetylglucosamine-6-phosphate deacetylase dimer

N-acetylglucosamine-6-phosphate deacetylase experimental SAS data
PYMOL model
Sample: N-acetylglucosamine-6-phosphate deacetylase dimer, 86 kDa Staphylococcus aureus protein
Buffer: 20 mM Tris-HCl 150 mM NaCl, pH: 8
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2016 Apr 26
Functional and solution structure studies of amino sugar deacetylase and deaminase enzymes from Staphylococcus aureus. FEBS Lett (2018)
...Horne CR, Pearce FG, Friemann R, North RA, Dobson RCJ
RgGuinier 3.2 nm
Dmax 10.1 nm
VolumePorod 107 nm3

SASDEB6 – Staphylococcus aureus glucosamine-6-phosphate deaminase

Glucosamine-6-phosphate deaminase experimental SAS data
PYMOL model
Sample: Glucosamine-6-phosphate deaminase dimer, 57 kDa Staphylococcus aureus protein
Buffer: 20 mM Tris-HCl 150 mM NaCl, pH: 8
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2016 Apr 26
Functional and solution structure studies of amino sugar deacetylase and deaminase enzymes from Staphylococcus aureus. FEBS Lett (2018)
...Horne CR, Pearce FG, Friemann R, North RA, Dobson RCJ
RgGuinier 2.7 nm
Dmax 8.9 nm
VolumePorod 84 nm3

SASDHR9 – GntR-type transcriptional regulator NanR from Escherichia coli

HTH-type transcriptional repressor NanR experimental SAS data
CUSTOM IN-HOUSE model
Sample: HTH-type transcriptional repressor NanR dimer, 59 kDa Escherichia coli protein
Buffer: 20 mM Tris, 150 mM NaCl, 0.1 % (w/v) sodium azide, pH: 8
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2019 Apr 20
Mechanism of NanR gene repression and allosteric induction of bacterial sialic acid metabolism (2020)
Horne C, Venugopal H, Panjikar S, Henrickson A, Brookes E, North R, Murphy J, Friemann R, Griffin M, Ramm G, Demeler B, Dobson R
RgGuinier 3.2 nm
Dmax 10.5 nm
VolumePorod 110 nm3

SASDHS9 – GntR-type transcriptional regulator NanR from Escherichia coli in the presence of N-acetylneuraminic acid

HTH-type transcriptional repressor NanR experimental SAS data
CUSTOM IN-HOUSE model
Sample: HTH-type transcriptional repressor NanR dimer, 59 kDa Escherichia coli protein
Buffer: 20 mM Tris, 150 mM NaCl, 20 mM Neu5Ac and 0.1 % (w/v) sodium azide, pH: 8
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2019 Apr 20
Mechanism of NanR gene repression and allosteric induction of bacterial sialic acid metabolism (2020)
Horne C, Venugopal H, Panjikar S, Henrickson A, Brookes E, North R, Murphy J, Friemann R, Griffin M, Ramm G, Demeler B, Dobson R
RgGuinier 3.1 nm
Dmax 10.1 nm
VolumePorod 105 nm3

SASDHT9 – Dimeric NanR-DNA hetero-complex from Escherichia coli

HTH-type transcriptional repressor NanR(GGTATA)2 repeat DNA experimental SAS data
CUSTOM IN-HOUSE model
Sample: HTH-type transcriptional repressor NanR dimer, 59 kDa Escherichia coli protein
(GGTATA)2 repeat DNA monomer, 11 kDa DNA
Buffer: 20 mM Tris, 150 mM NaCl, 0.1 % (w/v) sodium azide, pH: 8
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2019 Apr 20
Mechanism of NanR gene repression and allosteric induction of bacterial sialic acid metabolism (2020)
Horne C, Venugopal H, Panjikar S, Henrickson A, Brookes E, North R, Murphy J, Friemann R, Griffin M, Ramm G, Demeler B, Dobson R
RgGuinier 3.3 nm
Dmax 9.8 nm
VolumePorod 108 nm3