SAXS characterisation of CALX1.2 CBD12 construct

Roberto Kopke Salinas.

SASDQV8 – Na/Ca-exchange protein - CALX1.2 CBD12 domain in the Ca2+-free (Apo) state

Na/Ca-exchange protein, isoform D
MWI(0) 41 kDa
MWexpected 31 kDa
VPorod 48 nm3
log I(s) 7.86×10-2 7.86×10-3 7.86×10-4 7.86×10-5
Na/Ca-exchange protein, isoform D small angle scattering data  s, nm-1
ln I(s)
Na/Ca-exchange protein, isoform D Guinier plot ln 7.87×10-2 Rg: 2.6 nm 0 (2.6 nm)-2 s2
(sRg)2I(s)/I(0)
Na/Ca-exchange protein, isoform D Kratky plot 1.104 0 3 sRg
p(r)
Na/Ca-exchange protein, isoform D pair distance distribution function Rg: 2.8 nm 0 Dmax: 10.0 nm

Data validation


There are no models related to this curve.

SAXS data from solutions of the CALX1.2 CBD12 domain in the Ca2+-free (Apo) state in 20 mM TRIS, 200 mM NaCl, 1% v/v glycerol, 0.03% w/v NaN3, 1 mM β-mercaptoethanol, 2 mM EDTA, pH 7.5 were collected using a Xenocs Xeuss instrument at the University of São Paulo Institute of Physics (São Paulo, Brazil) equipped with a Pilatus 300K detector at a sample-detector distance of 0.8 m and at a wavelength of λ = 0.15 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). Solute concentrations ranging between 3 and 3 mg/ml were measured at 35°C. Four successive 1800 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted. The low angle data collected at lower concentration were merged with the highest concentration high angle data to yield the final composite scattering curve.

Na/Ca-exchange protein, isoform D (CALX1.2)
Mol. type   Protein
Organism   Drosophila melanogaster
Olig. state   Monomer
Mon. MW   31.4 kDa
 
UniProt   A0A0B4K6R7 (434-697)
Sequence   FASTA