Dystrophin SAXS data

Raphael Dos Santos Morais.

SASDGM2 – R16-24 del44-54 human dystrophin fragment

Human dystrophin central domain R16-24 del44-54 fragment
MWexperimental 52 kDa
MWexpected 57 kDa
VPorod 159 nm3
log I(s) 1.87×10-2 1.87×10-3 1.87×10-4 1.87×10-5
Human dystrophin central domain R16-24 del44-54 fragment small angle scattering data  s, nm-1
ln I(s)
Human dystrophin central domain R16-24 del44-54 fragment Guinier plot ln 1.88×10-2 Rg: 6.4 nm 0 (6.4 nm)-2 s2
(sRg)2I(s)/I(0)
Human dystrophin central domain R16-24 del44-54 fragment Kratky plot 1.104 0 3 sRg
p(r)
Human dystrophin central domain R16-24 del44-54 fragment pair distance distribution function Rg: 6.4 nm 0 Dmax: 25 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of the R16-24 del44-54 human dystrophin fragment in 20 mM Na-phosphate, 300 mM NaCl, 1 mM EDTA, 2% glycerol, pH 7.5 were collected on the SWING beam line at SOLEIL (Saint-Aubin, France) using a Eiger 4M detector at a sample-detector distance of 2 m and at a wavelength of λ = 0.1033 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). SEC-SAXS was performed at 15°C using the following parameters: Column: Agilent Bio SEC-5, 500Å (4.6 mm id * 300 mm); Flow rate: 0.3 mL/min; Sample injection concentration: 5.0 mg/mL; Injection volume: 50 μL. The data were collected through the SEC peak of the protein as a series of 17 x 1 second exposures. Each unsubtracted data frame was normalised to the intensity of the transmitted beam and radially averaged and the scattering of an appropriate solvent-blank was subtracted. The resulting subtracted frames were scaled and averaged to generate the final SAXS profile displayed in this entry. The experimental molecular weight was determined from the volume of correlation, Vc.

Storage temperature = UNKNOWN

Human dystrophin central domain R16-24 del44-54 fragment
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Monomer
Mon. MW   57.0 kDa
 
UniProt   P11532 (1990-3040)
Sequence   FASTA