Structural studies of the Hsp70/Hsp90 organizing protein of Plasmodium falciparum and its modulation of Hsp70 and Hsp90 ATPase activities.

Silva NSM, Bertolino-Reis DE, Dores-Silva PR, Anneta FB, Seraphim TV, Barbosa LRS, Borges JC, Biochim Biophys Acta Proteins Proteom :140282 (2019) Europe PMC

SASDFL5 – Plasmodium falciparum Hsp70/Hsp90 organizing protein, Hop

STI1-like protein
MWexperimental 170 kDa
MWexpected 136 kDa
VPorod 557 nm3
log I(s) 1.39×10-1 1.39×10-2 1.39×10-3 1.39×10-4
STI1-like protein small angle scattering data  s, nm-1
ln I(s)
STI1-like protein Guinier plot ln 1.39×10-1 Rg: 6.3 nm 0 (6.3 nm)-2 s2
(sRg)2I(s)/I(0)
STI1-like protein Kratky plot 1.104 0 3 sRg
p(r)
STI1-like protein pair distance distribution function Rg: 6.6 nm 0 Dmax: 24 nm

Data validation


Fits and models


log I(s)
 s, nm-1
STI1-like protein DAMFILT model
STI1-like protein DAMMIF model

Synchrotron SAXS data from solutions of Plasmodium falciparum Hsp70/Hsp90 organizing protein, Hop in 25 mM Tris-HCl, 100 mM NaCl, 1 mM EDTA, 1 mM β-mercaptoethanol, pH 8 were collected on the SAXS1 beam line at the Brazilian Synchrotron Light Laboratory (Campinas, Brazil) using a Pilatus 300K detector at a sample-detector distance of 0.9 m and at a wavelength of λ = 0.1488 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). Solute concentrations ranging between 1 and 2.8 mg/ml were measured . The X-ray exposure times were 6 x 10 sec and 1 x 100 sec for all samples. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted. The low angle data collected at lower concentrations were extrapolated to infinite dilution and merged with the higher concentration data to yield the final composite scattering curve.

Top: The model represents the averaged spatial disposition (volume and bead-occupancy corrected; damfilt model) obtained from several spatially aligned individual dummy atom model (DAM) reconstructions calculated using DAMMIF. Bottom: A single DAMMIF representative model with the lowest NSD from the aligned DAM cohort. The corresponding fit to the SAXS data is displayed.

STI1-like protein (PfHop)
Mol. type   Protein
Organism   Plasmodium falciparum
Olig. state   Dimer
Mon. MW   68.2 kDa
 
UniProt   Q8ILC1
Sequence   FASTA