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7 hits found for Varkud Satellite (VS) ribozyme

SASDKU3 – ...Varkud Satellite (VS) ribozyme

Neurospora Varkud Satellite ribozyme junction II-III-VI experimental SAS data
OTHER model
Sample: ...Varkud Satellite ribozyme junction II-III-VI monomer, 20 kDa Neurospora crassa RNA
Buffer: 50 mM MES, 50 mM KCl, 5 mM MgCl2,, pH: 6.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2014 Oct 29
...Varkud Satellite ribozyme Nucleic Acids Research (2021)
Dagenais P, Desjardins G, Legault P
RgGuinier 2.2 nm
Dmax 7.7 nm
VolumePorod 28 nm3

SASDKV3 – ...Varkud Satellite (VS) ribozyme

Neurospora Varkud Satellite ribozyme junction III-IV-V experimental SAS data
OTHER model
Sample: ...Varkud Satellite ribozyme junction III-IV-V monomer, 15 kDa Neurospora crassa RNA
Buffer: 50 mM MES, 50 mM KCl, 5 mM MgCl2,, pH: 6.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2014 Oct 29
...Varkud Satellite ribozyme Nucleic Acids Research (2021)
Dagenais P, Desjardins G, Legault P
RgGuinier 2.1 nm
Dmax 7.5 nm
VolumePorod 20 nm3

SASDKW3 – ...Varkud Satellite (VS) ribozyme

Neurospora Varkud Satellite ribozyme stem-loop VI experimental SAS data
OTHER model
Sample: ...Varkud Satellite ribozyme stem-loop VI monomer, 8 kDa Neurospora crassa RNA
Buffer: 50 mM MES, 50 mM KCl, 5 mM MgCl2,, pH: 6.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2015 Jul 7
...Varkud Satellite ribozyme Nucleic Acids Research (2021)
Dagenais P, Desjardins G, Legault P
RgGuinier 1.6 nm
Dmax 6.1 nm
VolumePorod 8 nm3

SASDKX3 – ...Varkud Satellite (VS) ribozyme without MgCl2

Neurospora Varkud Satellite minimal trans ribozyme experimental SAS data
Neurospora Varkud Satellite minimal trans ribozyme Kratky plot
Sample: ...Varkud Satellite minimal trans ribozyme monomer, 33 kDa Neurospora crassa RNA
Buffer: 50 mM MES, 50 mM KCl, pH: 6.5
Experiment: SAXS data collected at Xenocs BioXolver L with MetalJet, Département de Biochimie, Université de Montréal on 2019 Sep 19
...Varkud Satellite ribozyme Nucleic Acids Research (2021)
Dagenais P, Desjardins G, Legault P
RgGuinier 3.6 nm
Dmax 12.4 nm
VolumePorod 55 nm3

SASDKY3 – ...Varkud Satellite (VS) ribozyme in 5mM MgCl2

Neurospora Varkud Satellite minimal trans ribozyme experimental SAS data
OTHER model
Sample: ...Varkud Satellite minimal trans ribozyme monomer, 33 kDa Neurospora crassa RNA
Buffer: 50 mM MES, 50 mM KCl, 5 mM MgCl2,, pH: 6.5
Experiment: SAXS data collected at Xenocs BioXolver L with MetalJet, Département de Biochimie, Université de Montréal on 2019 Sep 19
...Varkud Satellite ribozyme Nucleic Acids Research (2021)
Dagenais P, Desjardins G, Legault P
RgGuinier 3.0 nm
Dmax 11.0 nm
VolumePorod 44 nm3

SASDKZ3 – ...Varkud Satellite (VS) ribozyme in 20mM MgCl2

Neurospora Varkud Satellite minimal trans ribozyme experimental SAS data
Neurospora Varkud Satellite minimal trans ribozyme Kratky plot
Sample: ...Varkud Satellite minimal trans ribozyme monomer, 33 kDa Neurospora crassa RNA
Buffer: 50 mM MES, 50 mM KCl, 20 mM MgCl2,, pH: 6.5
Experiment: SAXS data collected at Xenocs BioXolver L with MetalJet, Département de Biochimie, Université de Montréal on 2019 Sep 19
...Varkud Satellite ribozyme Nucleic Acids Research (2021)
Dagenais P, Desjardins G, Legault P
RgGuinier 3.5 nm
Dmax 11.4 nm
VolumePorod 61 nm3

SASDAC9 – Varkud Satellite (VS) ribozyme in Tris

Varkud Satellite (VS) ribozyme experimental SAS data
DAMMIN model
Sample: Varkud Satellite (VS) ribozyme dimer, 120 kDa Neurospora RNA
Buffer: 10 mM Tris 25 mM KCl 5 mM MgCl2, pH: 7.5
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2012 Mar 6
...Varkud satellite ribozyme. Nat Chem Biol 11(11):840-6 (2015)
Suslov NB, DasGupta S, Huang H, Fuller JR, Lilley DM, Rice PA, Piccirilli JA
RgGuinier 3.9 nm
Dmax 16.4 nm
VolumePorod 240 nm3