Vibrio cholerae's ToxRS bile sensing system.

Gubensäk N, Sagmeister T, Buhlheller C, Geronimo BD, Wagner GE, Petrowitsch L, Gräwert MA, Rotzinger M, Berger TMI, Schäfer J, Usón I, Reidl J, Sánchez-Murcia PA, Zangger K, Pavkov-Keller T, Elife 12 (2023) Europe PMC

SASDR55 – A complex between the periplasmic domains of cholera toxin transcriptional activator ToxR and transmembrane regulatory protein ToxS bound to bile salt

Cholera toxin transcriptional activator
Transmembrane regulatory protein ToxS
bile acid: sodium cholate hydrate
MWexperimental 30 kDa
MWexpected 49 kDa
VPorod 60 nm3
log I(s) 2.91×103 2.91×102 2.91×101 2.91×100
Cholera toxin transcriptional activator Transmembrane regulatory protein ToxS bile acid: sodium cholate hydrate small angle scattering data  s, nm-1
ln I(s)
Cholera toxin transcriptional activator Transmembrane regulatory protein ToxS bile acid: sodium cholate hydrate Guinier plot ln 2.91×103 Rg: 2.4 nm 0 (2.4 nm)-2 s2
(sRg)2I(s)/I(0)
Cholera toxin transcriptional activator Transmembrane regulatory protein ToxS bile acid: sodium cholate hydrate Kratky plot 1.104 0 3 sRg
p(r)
Cholera toxin transcriptional activator Transmembrane regulatory protein ToxS bile acid: sodium cholate hydrate pair distance distribution function Rg: 2.3 nm 0 Dmax: 6.6 nm

Data validation


Fits and models


log I(s)
 s, nm-1
Cholera toxin transcriptional activator Transmembrane regulatory protein ToxS bile acid: sodium cholate hydrate CUSTOM IN-HOUSE model

Synchrotron SAXS data from solutions of the ToxRp/ToxSp complex bound to bile salt in 50 mM Na2HPO4, 300 mM NaCl, 3% glycerol, pH 8 were collected on the EMBL P12 beam line at PETRA III (DESY, Hamburg, Germany) using a Pilatus 6M detector at a sample-detector distance of 3 m and at a wavelength of λ = 0.124 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC) SAS was employed. The SEC parameters were as follows: A 100.00 μl sample at 10 mg/ml was injected at a 0.30 ml/min flow rate onto a GE Superdex 75 Increase 5/150 column at 20°C. 1800 successive 0.500 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

There is more than one bile molecule bound to the complex. Despite the use of SEC, it seems like the sample is slightly polydisperse with bile molecules weakly attaching to the surface of the ToxRSp complex (confirmed with a number of other techniques). Bile salt: https://pubchem.ncbi.nlm.nih.gov/compound/Sodium-cholate-hydrate

Cholera toxin transcriptional activator (ToxRp)
Mol. type   Protein
Organism   Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Olig. state   Monomer
Mon. MW   11.6 kDa
 
UniProt   P15795 (201-294)
Sequence   FASTA
 
Transmembrane regulatory protein ToxS (ToxSp)
Mol. type   Protein
Organism   Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Olig. state   Dimer
Mon. MW   18.7 kDa
 
UniProt   P24003 (25-173)
Sequence   FASTA
 
bile acid: sodium cholate hydrate (bile)
Mol. type   Other
Olig. state   Monomer
Mon. MW   0.4 kDa
Chemical formula