Browse by DISSEMINATION: Benchmark (standard proteins)

SASDCF8 – Bovine serum albumin (WAXS)

Serum albumin experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Serum albumin monomer, 66 kDa Bos taurus protein
Buffer: Hepes, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2015 Jun 25
WAXS benchmark on standard proteins
Maxim Petoukhov
RgGuinier 2.7 nm

SASDCG8 – Bovine carbonic anhydrase (WAXS)

Carbonic anhydrase 2 experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Carbonic anhydrase 2 monomer, 29 kDa Bos taurus protein
Buffer: Tbs, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2015 Jul 16
WAXS benchmark on standard proteins
Maxim Petoukhov
RgGuinier 1.9 nm

SASDCH8 – Horse heart cytochrome C (WAXS)

Cytochrome c experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Cytochrome c monomer, 12 kDa Equus caballus protein
Buffer: tbs, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2015 Jul 16
WAXS benchmark on standard proteins
Maxim Petoukhov
RgGuinier 1.2 nm

SASDCJ8 – Glucose isomerase (WAXS)

Xylose isomerase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Xylose isomerase tetramer, 172 kDa Streptomyces rubiginosus protein
Buffer: 100 mM tris pH 8.0, 100 mM NaCl, 1 mM MgCl2, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2016 Oct 17
WAXS benchmark on standard proteins
Maxim Petoukhov
RgGuinier 3.2 nm

SASDCK8 – Lysozyme (WAXS)

Lysozyme C experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Lysozyme C monomer, 14 kDa Gallus gallus protein
Buffer: 40 mM Sodium Acetate pH 4.0, 50 mM NaCl, pH: 4
Experiment: SAXS data collected at EMBL P12, PETRA III on 2015 May 31
WAXS benchmark on standard proteins
Maxim Petoukhov
RgGuinier 1.4 nm

SASDCL8 – Horse myoglobin (WAXS)

Myoglobin experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Myoglobin monomer, 17 kDa Equus caballus protein
Buffer: 100 mM tris pH 7.5, 100 mM NaCl, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2015 Jun 2
WAXS benchmark on standard proteins
Maxim Petoukhov
RgGuinier 1.6 nm

SASDG52 – 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) vesicles: 30 nm filter extrusion

1,2-dimyristoyl-sn-glycero-3-phosphocholine experimental SAS data
OTHER [STATIC IMAGE] model
Sample: 1,2-dimyristoyl-sn-glycero-3-phosphocholine monomer, 1 kDa
Buffer: water, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jul 9
Restoring structural parameters of lipid mixtures from small-angle X-ray scattering data Journal of Applied Crystallography 54(1) (2021)
Konarev P, Gruzinov A, Mertens H, Svergun D
Dmax 66.0 nm

SASDG62 – 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) vesicles: 50 nm filter extrusion

1,2-dimyristoyl-sn-glycero-3-phosphocholine experimental SAS data
OTHER [STATIC IMAGE] model
Sample: 1,2-dimyristoyl-sn-glycero-3-phosphocholine monomer, 1 kDa
Buffer: water, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jul 9
Restoring structural parameters of lipid mixtures from small-angle X-ray scattering data Journal of Applied Crystallography 54(1) (2021)
Konarev P, Gruzinov A, Mertens H, Svergun D
Dmax 81.5 nm

SASDG72 – 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) vesicles: 100 nm filter extrusion

1,2-dimyristoyl-sn-glycero-3-phosphocholine experimental SAS data
OTHER [STATIC IMAGE] model
Sample: 1,2-dimyristoyl-sn-glycero-3-phosphocholine monomer, 1 kDa
Buffer: water, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jul 9
Restoring structural parameters of lipid mixtures from small-angle X-ray scattering data Journal of Applied Crystallography 54(1) (2021)
Konarev P, Gruzinov A, Mertens H, Svergun D
Dmax 111.0 nm

SASDG82 – 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) vesicles: 200 nm filter extrusion

1,2-dimyristoyl-sn-glycero-3-phosphocholine experimental SAS data
OTHER [STATIC IMAGE] model
Sample: 1,2-dimyristoyl-sn-glycero-3-phosphocholine monomer, 1 kDa
Buffer: water, pH: 7
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Jul 9
Restoring structural parameters of lipid mixtures from small-angle X-ray scattering data Journal of Applied Crystallography 54(1) (2021)
Konarev P, Gruzinov A, Mertens H, Svergun D
Dmax 147.0 nm