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22 hits found for Felix

SASDFA3 – Human ATP-citrate synthase (ACLY) full length in HBS

ATP-citrate synthase experimental SAS data
ATP-citrate synthase Kratky plot
Sample: ATP-citrate synthase tetramer, 458 kDa Homo sapiens protein
Buffer: 20mM HEPES, 150mM NaCl, pH: 7.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2017 Sep 4
Structure of ATP citrate lyase and the origin of citrate synthase in the Krebs cycle. Nature 568(7753):571-575 (2019)
...Felix J, Dansercoer A, De Vos D, Bloch Y, Van Beeumen J, Svergun D, Gutsche I, Savvides SN, Verstraete K
RgGuinier 6.1 nm
Dmax 19.0 nm
VolumePorod 765 nm3

SASDFB3 – Human ATP-citrate synthers (ACLY) full length in HBS + Citrate

ATP-citrate synthase experimental SAS data
ATP-citrate synthase Kratky plot
Sample: ATP-citrate synthase tetramer, 458 kDa Homo sapiens protein
Buffer: 20mM HEPES, 150mM NaCl, 50mM Tris, 20mM citrate, pH: 7.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2017 Sep 4
Structure of ATP citrate lyase and the origin of citrate synthase in the Krebs cycle. Nature 568(7753):571-575 (2019)
...Felix J, Dansercoer A, De Vos D, Bloch Y, Van Beeumen J, Svergun D, Gutsche I, Savvides SN, Verstraete K
RgGuinier 6.2 nm
Dmax 19.0 nm
VolumePorod 787 nm3

SASDFC3 – Human ATP-citrate synthase (ACLY) full length in HBS + Citrate + Coenzyme-A

ATP-citrate synthase experimental SAS data
MULTIFOXS model
Sample: ATP-citrate synthase tetramer, 458 kDa Homo sapiens protein
Buffer: 20mM HEPES, 150mM NaCl, 50mM Tris, 20mM citrate, 2mM CoA, pH: 7.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2017 Sep 4
Structure of ATP citrate lyase and the origin of citrate synthase in the Krebs cycle. Nature 568(7753):571-575 (2019)
...Felix J, Dansercoer A, De Vos D, Bloch Y, Van Beeumen J, Svergun D, Gutsche I, Savvides SN, Verstraete K
RgGuinier 5.9 nm
Dmax 17.0 nm
VolumePorod 775 nm3

SASDE36 – Human ATP-citrate synthase (ACLY) in HBS

ATP-citrate synthase experimental SAS data
MULTIFOXS model
Sample: ATP-citrate synthase tetramer, 458 kDa Homo sapiens protein
Buffer: 20mM HEPES, 150mM NaCl, pH: 7.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 May 6
Structure of ATP citrate lyase and the origin of citrate synthase in the Krebs cycle. Nature 568(7753):571-575 (2019)
...Felix J, Dansercoer A, De Vos D, Bloch Y, Van Beeumen J, Svergun D, Gutsche I, Savvides SN, Verstraete K
RgGuinier 6.0 nm
Dmax 17.5 nm
VolumePorod 738 nm3

SASDE46 – Human ATP-citrate synthers (ACLY) in HBS + Citrate

ATP-citrate synthase experimental SAS data
ATP-citrate synthase Kratky plot
Sample: ATP-citrate synthase tetramer, 458 kDa Homo sapiens protein
Buffer: 20mM HEPES, 150mM NaCl, 50mM Tris, 20mM citrate, pH: 7.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 May 6
Structure of ATP citrate lyase and the origin of citrate synthase in the Krebs cycle. Nature 568(7753):571-575 (2019)
...Felix J, Dansercoer A, De Vos D, Bloch Y, Van Beeumen J, Svergun D, Gutsche I, Savvides SN, Verstraete K
RgGuinier 6.1 nm
Dmax 17.5 nm
VolumePorod 747 nm3

SASDE56 – Human ATP-citrate synthase (ACLY) in HBS + Citrate + Coenzyme-A

ATP-citrate synthase experimental SAS data
SASREF CV model
Sample: ATP-citrate synthase tetramer, 458 kDa Homo sapiens protein
Buffer: 20mM HEPES, 150mM NaCl, 50mM Tris, 20mM citrate, 2mM CoA, pH: 7.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 May 5
Structure of ATP citrate lyase and the origin of citrate synthase in the Krebs cycle. Nature 568(7753):571-575 (2019)
...Felix J, Dansercoer A, De Vos D, Bloch Y, Van Beeumen J, Svergun D, Gutsche I, Savvides SN, Verstraete K
RgGuinier 5.8 nm
Dmax 16.5 nm
VolumePorod 709 nm3

SASDE66 – C. limicola ATP-citrate lyase (ACL) in HBS

ATP-citrate lyase experimental SAS data
ATP-citrate lyase Kratky plot
Sample: ATP-citrate lyase tetramer, 429 kDa Chlorobium limicola protein
Buffer: 20mM HEPES, 150mM NaCl, pH: 7.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2017 Sep 4
Structure of ATP citrate lyase and the origin of citrate synthase in the Krebs cycle. Nature 568(7753):571-575 (2019)
...Felix J, Dansercoer A, De Vos D, Bloch Y, Van Beeumen J, Svergun D, Gutsche I, Savvides SN, Verstraete K
RgGuinier 6.1 nm
Dmax 20.0 nm
VolumePorod 666 nm3

SASDE76 – C. limicola ATP-citrate lyase (ACL) in HBS + Citrate

ATP-citrate lyase experimental SAS data
ATP-citrate lyase Kratky plot
Sample: ATP-citrate lyase tetramer, 429 kDa Chlorobium limicola protein
Buffer: 20mM HEPES, 150mM NaCl, 50mM Tris, 20mM citrate, pH: 7.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2017 Sep 4
Structure of ATP citrate lyase and the origin of citrate synthase in the Krebs cycle. Nature 568(7753):571-575 (2019)
...Felix J, Dansercoer A, De Vos D, Bloch Y, Van Beeumen J, Svergun D, Gutsche I, Savvides SN, Verstraete K
RgGuinier 6.0 nm
Dmax 20.0 nm
VolumePorod 672 nm3

SASDE86 – C. limicola ATP-citrate lyase (ACL) in HBS + Citrate + Coenzyme-A

ATP-citrate lyase experimental SAS data
ATP-citrate lyase Kratky plot
Sample: ATP-citrate lyase tetramer, 429 kDa Chlorobium limicola protein
Buffer: 20mM HEPES, 150mM NaCl, 50mM Tris, 20mM citrate, 2mM CoA, pH: 7.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2017 Sep 4
Structure of ATP citrate lyase and the origin of citrate synthase in the Krebs cycle. Nature 568(7753):571-575 (2019)
...Felix J, Dansercoer A, De Vos D, Bloch Y, Van Beeumen J, Svergun D, Gutsche I, Savvides SN, Verstraete K
RgGuinier 5.7 nm
Dmax 17.5 nm
VolumePorod 791 nm3

SASDAR6 – human CSF-1:CSF-1R extracellular signalling complex

Macrophage colony-stimulating factor 1Macrophage colony-stimulating factor 1 receptor experimental SAS data
SASREF model
Sample: Macrophage colony-stimulating factor 1 dimer, 35 kDa Homo sapiens protein
Macrophage colony-stimulating factor 1 receptor dimer, 107 kDa Homo sapiens protein
Buffer: 50 mM NaH2PO4, 100 m, pH: 7.4
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2009 Mar 13
Structure and Assembly Mechanism of the Signaling Complex Mediated by Human CSF-1. Structure 23(9):1621-1631 (2015)
Felix J, De Munck S, Verstraete K, Meuris L, Callewaert N, Elegheert J, Savvides SN
RgGuinier 5.7 nm
Dmax 17.9 nm
VolumePorod 299 nm3

SASDK48 – Histidine kinase AdeS - DHp-CA Domain

Histidine kinase experimental SAS data
MULTIFOXS model
Sample: Histidine kinase dimer, 51 kDa Acinetobacter baumannii protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.4
Experiment: SAXS data collected at BL19U2, Shanghai Synchrotron Radiation Facility (SSRF) on 2018 Apr 21
Proteolysis and multimerization regulate signaling along the two-component regulatory system AdeRS. iScience 24(5):102476 (2021)
...Felix J, Wu D, Wu K, Gutsche I, Wu Y, Hwang PM, She J, Wen Y
RgGuinier 2.8 nm
Dmax 9.1 nm
VolumePorod 85 nm3

SASDK58 – Histidine kinase AdeS - cytoplasmic domain

Histidine kinase experimental SAS data
OTHER model
Sample: Histidine kinase hexamer, 186 kDa Acinetobacter baumannii protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.4
Experiment: SAXS data collected at BL19U2, Shanghai Synchrotron Radiation Facility (SSRF) on 2019 Jun 19
Proteolysis and multimerization regulate signaling along the two-component regulatory system AdeRS. iScience 24(5):102476 (2021)
...Felix J, Wu D, Wu K, Gutsche I, Wu Y, Hwang PM, She J, Wen Y
RgGuinier 4.6 nm
Dmax 16.3 nm
VolumePorod 378 nm3

SASDMX8 – Iron oxide nanoparticles (NP-N2) (30% of 9 kDa PEG tails)

Iron oxide nanoparticles (NP-N2) (30% of 9 kDa PEG tails) experimental SAS data
OTHER [STATIC IMAGE] model
Sample: Iron oxide nanoparticles (NP-N2) (30% of 9 kDa PEG tails) 0, 5000 kDa
Buffer: 0.05 M Tris-HCl, 0.05 M NaCl, 0.01 M KCl, 0.005 M MgCl2, pH: 4.6
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2011 Jun 23
Coat Protein-Dependent Behavior of Poly(ethylene glycol) Tails in Iron Oxide Core Virus-like Nanoparticles. ACS Appl Mater Interfaces 7(22):12089-98 (2015)
...Felix OR, Carlson K, Stein BD, Konarev PV, Svergun DI, Dragnea B, Bronstein LM
Dmax 25.0 nm

SASDMY8 – Iron oxide nanoparticles (NP-N3) (60% of 9 kDa PEG tails)

Iron oxide nanoparticles (NP-N3) (60% of 9 kDa PEG tails) experimental SAS data
OTHER [STATIC IMAGE] model
Sample: Iron oxide nanoparticles (NP-N3) (60% of 9 kDa PEG tails) 0, 5000 kDa
Buffer: 0.05 M Tris-HCl, 0.05 M NaCl, 0.01 M KCl, 0.005 M MgCl2, pH: 4.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2011 Jun 23
Coat Protein-Dependent Behavior of Poly(ethylene glycol) Tails in Iron Oxide Core Virus-like Nanoparticles. ACS Appl Mater Interfaces 7(22):12089-98 (2015)
...Felix OR, Carlson K, Stein BD, Konarev PV, Svergun DI, Dragnea B, Bronstein LM
Dmax 26.0 nm

SASDMZ8 – Iron oxide nanoparticles (NP-P3) (60% of 5 kDa PEG tails)

Iron oxide nanoparticles (NP-P3) (60% of 5 kDa PEG tails) experimental SAS data
OTHER [STATIC IMAGE] model
Sample: Iron oxide nanoparticles (NP-P3) (60% of 5 kDa PEG tails) 0, 5000 kDa
Buffer: 0.05 M Tris-HCl, 0.05 M NaCl, 0.01 M KCl, 0.005 M MgCl2, pH: 4.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2011 Jun 23
Coat Protein-Dependent Behavior of Poly(ethylene glycol) Tails in Iron Oxide Core Virus-like Nanoparticles. ACS Appl Mater Interfaces 7(22):12089-98 (2015)
...Felix OR, Carlson K, Stein BD, Konarev PV, Svergun DI, Dragnea B, Bronstein LM
Dmax 26.0 nm

SASDM29 – Iron oxide nanoparticles (NP-N2) encapsulated into brome mosaic virus (BMV)

Iron oxide nanoparticles (NP-N2) encapsulated into brome mosaic virus (BMV) experimental SAS data
OTHER [STATIC IMAGE] model
Sample: Iron oxide nanoparticles (NP-N2) encapsulated into brome mosaic virus (BMV) 0, 5000 kDa
Buffer: 0.05 M Tris-HCl, 0.05 M NaCl, 0.01 M KCl, 0.005 M MgCl2, pH: 4.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2011 Jun 23
Coat Protein-Dependent Behavior of Poly(ethylene glycol) Tails in Iron Oxide Core Virus-like Nanoparticles. ACS Appl Mater Interfaces 7(22):12089-98 (2015)
...Felix OR, Carlson K, Stein BD, Konarev PV, Svergun DI, Dragnea B, Bronstein LM
Dmax 25.5 nm

SASDM39 – Iron oxide nanoparticles (NP-P3) encapsulated into brome mosaic virus (BMV)

Iron oxide nanoparticles (NP-P3) encapsulated into brome mosaic virus (BMV) experimental SAS data
OTHER [STATIC IMAGE] model
Sample: Iron oxide nanoparticles (NP-P3) encapsulated into brome mosaic virus (BMV) 0, 5000 kDa
Buffer: 50 mM Tris-HCl, 50 mM NaCl, 10 mM KCl, 5 mM MgCl2, pH: 4.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2011 Jun 23
Coat Protein-Dependent Behavior of Poly(ethylene glycol) Tails in Iron Oxide Core Virus-like Nanoparticles. ACS Appl Mater Interfaces 7(22):12089-98 (2015)
...Felix OR, Carlson K, Stein BD, Konarev PV, Svergun DI, Dragnea B, Bronstein LM
Dmax 25.0 nm

SASDM49 – Iron oxide nanoparticles (NP-N3) encapsulated into hepatitis B virus (HBV)

Iron oxide nanoparticles (NP-N3) encapsulated into hepatitis B virus (HBV) experimental SAS data
OTHER [STATIC IMAGE] model
Sample: Iron oxide nanoparticles (NP-N3) encapsulated into hepatitis B virus (HBV) 0, 5000 kDa
Buffer: 0.5 M LiCl, 50 mM HEPES, 2 mM DTT, pH 7.5, pH: 7.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2011 Jun 23
Coat Protein-Dependent Behavior of Poly(ethylene glycol) Tails in Iron Oxide Core Virus-like Nanoparticles. ACS Appl Mater Interfaces 7(22):12089-98 (2015)
...Felix OR, Carlson K, Stein BD, Konarev PV, Svergun DI, Dragnea B, Bronstein LM
Dmax 25.5 nm

SASDM59 – brome mosaic virus (BMV)

brome mosaic virus (BMV) experimental SAS data
brome mosaic virus (BMV) Kratky plot
Sample: brome mosaic virus (BMV) monomer, 5000 kDa
Buffer: 50 mM Tris-HCl, 50 mM NaCl, 10 mM KCl, 5 mM MgCl2, pH: 4.6
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2011 Jun 23
Coat Protein-Dependent Behavior of Poly(ethylene glycol) Tails in Iron Oxide Core Virus-like Nanoparticles. ACS Appl Mater Interfaces 7(22):12089-98 (2015)
...Felix OR, Carlson K, Stein BD, Konarev PV, Svergun DI, Dragnea B, Bronstein LM
Dmax 31.7 nm

SASDM69 – Hepatitis B virus (HBV)

Hepatitis B virus (HBV) experimental SAS data
Hepatitis B virus (HBV) Kratky plot
Sample: Hepatitis B virus (HBV) None,
Buffer: 0.5 M LiCl, 50 mM HEPES, 2 mM DTT, pH 7.5, pH: 7.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2011 Jun 23
Coat Protein-Dependent Behavior of Poly(ethylene glycol) Tails in Iron Oxide Core Virus-like Nanoparticles. ACS Appl Mater Interfaces 7(22):12089-98 (2015)
...Felix OR, Carlson K, Stein BD, Konarev PV, Svergun DI, Dragnea B, Bronstein LM
Dmax 32.0 nm

SASDA89 – Complex between ovine GM-CSF and GM-CSF/IL-2 inhibition factor

GM-CSF/IL-2 inhibition factorGranulocyte-macrophage colony-stimulating factor experimental SAS data
NONE model
Sample: GM-CSF/IL-2 inhibition factor tetramer, 120 kDa Orf virus protein
Granulocyte-macrophage colony-stimulating factor dimer, 29 kDa Ovis aries protein
Buffer: 20 mM HEPES 150 mM NaCl, pH: 7.4
Experiment: SAXS data collected at SWING, SOLEIL on 2014 Sep 10
Structural basis of GM-CSF and IL-2 sequestration by the viral decoy receptor GIF. Nat Commun 7:13228 (2016)
Felix J, Kandiah E, De Munck S, Bloch Y, van Zundert GC, Pauwels K, Dansercoer A, Novanska K, Read RJ, Bonvin AM, Vergauwen B, Verstraete K, Gutsche I, Savvides SN
RgGuinier 3.8 nm
Dmax 12.4 nm
VolumePorod 231 nm3

SASDA99 – Complex between ovine IL-2 and GM-CSF/IL-2 inhibition factor

GM-CSF/IL-2 inhibition factorInterleukin-2 experimental SAS data
NONE model
Sample: GM-CSF/IL-2 inhibition factor tetramer, 120 kDa Orf virus protein
Interleukin-2 monomer, 16 kDa Ovis aries protein
Buffer: 20 mM HEPES 150 mM NaCl, pH: 7.4
Experiment: SAXS data collected at SWING, SOLEIL on 2014 Sep 10
Structural basis of GM-CSF and IL-2 sequestration by the viral decoy receptor GIF. Nat Commun 7:13228 (2016)
Felix J, Kandiah E, De Munck S, Bloch Y, van Zundert GC, Pauwels K, Dansercoer A, Novanska K, Read RJ, Bonvin AM, Vergauwen B, Verstraete K, Gutsche I, Savvides SN
RgGuinier 4.1 nm
Dmax 12.9 nm
VolumePorod 253 nm3