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4 hits found for Polsinelli

SASDKG4 – Malus domestica double bond reductase (MdDBR) apoform

Malus domestica double bond reductase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Malus domestica double bond reductase dimer, 77 kDa Malus domestica protein
Buffer: 50 mM Tris-HCl, 100 mM NaCl., pH: 7.5
Experiment: SAXS data collected at Anton Paar SAXSpoint 2.0, Institute of Biotechnology, Czech Academy of Sciences/Centre of Molecular Structure on 2020 Oct 23
The structural and functional characterization of Malus domestica double bond reductase MdDBR provides insights towards the identification of its substrates International Journal of Biological Macromolecules 171:89-99 (2021)
...Polsinelli I, Demitri N, Musiani F, Martens S, Benini S
RgGuinier 3.0 nm
Dmax 9.9 nm
VolumePorod 110 nm3

SASDKH4 – Malus domestica double bond reductase in the presence of NADPH 5mM

Malus domestica double bond reductase experimental SAS data
PYMOL model
Sample: Malus domestica double bond reductase dimer, 77 kDa Malus domestica protein
Buffer: 50 mM Tris-HCl, 100 mM NaCl, 5 mM NADPH, pH: 7.5
Experiment: SAXS data collected at Anton Paar SAXSpoint 2.0, Institute of Biotechnology, Czech Academy of Sciences/Centre of Molecular Structure on 2020 Oct 23
The structural and functional characterization of Malus domestica double bond reductase MdDBR provides insights towards the identification of its substrates International Journal of Biological Macromolecules 171:89-99 (2021)
...Polsinelli I, Demitri N, Musiani F, Martens S, Benini S
RgGuinier 3.1 nm
Dmax 10.7 nm
VolumePorod 99 nm3

SASDRS7 – Radical SAM enzyme peptide epimerase in the presence of SAM (S-adenosyl-L-methionine)

Putative peptide biosynthesis protein YydG experimental SAS data
DADIMODO model
Sample: Putative peptide biosynthesis protein YydG dimer, 80 kDa Bacillus subtilis (strain … protein
Buffer: 25 mM HEPES, 150 mM NaCl, 1 mM DTT, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2022 Nov 29
Structural and mechanistic basis for RiPP epimerization by a radical SAM enzyme. Nat Chem Biol (2023)
...Polsinelli I, Chavas LMG, Fyfe CD, Guillot A, Fradale L, Brewee C, Grimaldi S, Gerbaud G, Thureau A, Legrand P, Berteau O, Benjdia A
RgGuinier 2.9 nm
Dmax 11.8 nm
VolumePorod 115 nm3

SASDRR7 – Radical SAM enzyme peptide epimerase in the presence of SAM (S-adenosyl-L-methionine) and a peptide subtrate

Putative peptide biosynthesis protein YydG experimental SAS data
DADIMODO model
Sample: Putative peptide biosynthesis protein YydG dimer, 80 kDa Bacillus subtilis (strain … protein
Buffer: 25 mM HEPES, 150 mM NaCl, 1 mM DTT, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2022 Nov 30
Structural and mechanistic basis for RiPP epimerization by a radical SAM enzyme. Nat Chem Biol (2023)
...Polsinelli I, Chavas LMG, Fyfe CD, Guillot A, Fradale L, Brewee C, Grimaldi S, Gerbaud G, Thureau A, Legrand P, Berteau O, Benjdia A
RgGuinier 2.9 nm
Dmax 12.0 nm
VolumePorod 113 nm3