Dystrophin's central domain forms a complex filament that becomes disorganized by in-frame deletions.

Delalande O, Molza AE, Dos Santos Morais R, Chéron A, Pollet É, Raguenes-Nicol C, Tascon C, Giudice E, Guilbaud M, Nicolas A, Bondon A, Leturcq F, Férey N, Baaden M, Perez J, Roblin P, Piétri-Rouxel F, Hubert JF, Czjzek M, Le Rumeur E, J Biol Chem 293(18):6637-6646 (2018) Europe PMC

SASDBB3 – Human dystrophin central domain single repeat 23

Dystrophin central domain single repeat 23
MWexperimental 13 kDa
MWexpected 17 kDa
VPorod 20 nm3
log I(s) 3.53×10-2 3.53×10-3 3.53×10-4 3.53×10-5
Dystrophin central domain single repeat 23 small angle scattering data  s, nm-1
ln I(s)
Dystrophin central domain single repeat 23 Guinier plot ln 3.53×10-2 Rg: 2.2 nm 0 (2.2 nm)-2 s2
(sRg)2I(s)/I(0)
Dystrophin central domain single repeat 23 Kratky plot 1.104 0 3 sRg
p(r)
Dystrophin central domain single repeat 23 pair distance distribution function Rg: 2.2 nm 0 Dmax: 7.4 nm

Data validation


Fits and models


log I(s)
 s, nm-1
Dystrophin central domain single repeat 23 NONE model

Synchrotron SAXS data were measured from solutions of Human Dystrophin central domain repeat 23 (amino acids 2800-2939) in 20 mM Tris 150 mM NaCl, 1 mM EDTA, 2% glycerol buffer using size exclusion chromatography (SEC-SAXS) in combination with UV spectroscopy on the SWING beam line (SOLEIL, Saint-Aubin, France). The sample load concentration was 20 mg/mL. The scattering data, I(s) vs s (s = 4π sin θ/λ, where 2θ is the scattering angle) were collected through the corresponding SEC protein elution peak (30 x 1.5 s frames) as well as from the SEC column running buffer. The buffer scattering contributions were subtracted from each sample frame, which were then scaled and averaged to produce the SAXS profile displayed in this entry. The molecular weight estimate (MW) are derived from the Porod volume, Vp, where MW is approximately Vp/1.6. The SEC Rg and I(0) and UV trace are included in the additional files to this entry.

Cell temperature = UNKNOWN. Concentration = UNKNOWN

Dystrophin central domain single repeat 23 (Dystrophin 2800-2939)
Mol. type   Protein
Organism   Homo sapiens
Olig. state   Monomer
Mon. MW   16.5 kDa
 
UniProt   P11532 (2800-2939)
Sequence   FASTA