Infectious Bursal Disease Virus VP3

Diego Ferrero.

SASDUR7 – Infectious Bursal Disease Virus VP3 (central domains at pH 8.0)

Structural polyprotein (Capsid protein VP3: K947R; Δ756-843; Δ977-1012)
MWexperimental 18 kDa
MWexpected 18 kDa
VPorod 21 nm3
log I(s) 1.25×103 1.25×102 1.25×101 1.25×100
Structural polyprotein (Capsid protein VP3: K947R; Δ756-843; Δ977-1012) small angle scattering data  s, nm-1
ln I(s)
Structural polyprotein (Capsid protein VP3: K947R; Δ756-843; Δ977-1012) Guinier plot ln 1.26×103 Rg: 2.5 nm 0 (2.5 nm)-2 s2
(sRg)2I(s)/I(0)
Structural polyprotein (Capsid protein VP3: K947R; Δ756-843; Δ977-1012) Kratky plot 1.104 0 3 sRg
Dmax: 10 nm

Data validation


There are no models related to this curve.

Synchrotron SAXS data from solutions of Infectious Bursal Disease Virus VP3 (central domains) in 50 mM TRIS, 500 mM NaCl, 2 mM DTT, pH 8 were collected on the EMBL P12 beam line at PETRA III (DESY; Hamburg, Germany) using a Pilatus 6M detector at a sample-detector distance of 3 m and at a wavelength of λ = 0.123981 nm (I(s) vs s, where s = 4πsinθ/λ, and 2θ is the scattering angle). In-line size-exclusion chromatography (SEC) SAS was employed. The SEC parameters were as follows: A 40.00 μl sample at 5 mg/ml was injected at a 0.50 ml/min flow rate onto a GE Superdex 200 5/150 column at 25°C. 202 successive 0.995 second frames were collected. The data were normalized to the intensity of the transmitted beam and radially averaged; the scattering of the solvent-blank was subtracted.

Structural polyprotein (Capsid protein VP3: K947R; Δ756-843; Δ977-1012) (IBDV VP3)
Mol. type   Protein
Organism   Infectious bursal disease virus
Olig. state   Monomer
Mon. MW   17.8 kDa
 
UniProt   P61825 (844-976)
Sequence   FASTA