Small Angle Scattering Biological Data Bank SASBDB

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7 hits found for Mohammed

SASDPF3 – Receptor-type tyrosine-protein phosphatase kappa extracellular domains (PTPRK-ECDs)

Receptor-type tyrosine-protein phosphatase kappa experimental SAS data

Sample:	Receptor-type tyrosine-protein phosphatase kappa monomer, 82 kDa Homo sapiens protein
Buffer:	50 mM MES, 250 mM NaCl, 3% v/v glycerol,, pH: 6
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2021 Dec 13

Determinants of receptor tyrosine phosphatase homophilic adhesion: structural comparison of PTPRK and PTPRM extracellular domains Journal of Biological Chemistry :102750 (2022)
...Mohammed A, Svergun D, Jeffries C, Graham S, Sharpe H, Deane J

R_g^Guinier	7.0	nm
D_max	26.0	nm
Volume^Porod	252	nm³

SASDPG3 – Receptor-type tyrosine-protein phosphatase mu extracellular domains (PTPRM-ECDs)

Receptor-type tyrosine-protein phosphatase mu experimental SAS data

Sample:	Receptor-type tyrosine-protein phosphatase mu monomer, 82 kDa Homo sapiens protein
Buffer:	50 mM MES, 250 mM NaCl, 3% v/v glycerol,, pH: 6
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2021 Dec 13

R_g^Guinier	7.2	nm
D_max	26.0	nm
Volume^Porod	255	nm³

SASDMA9 – Diacetylchitobiose deacetylase (isolated hexamer from SEC-SAXS)

Diacetylchitobiose deacetylase experimental SAS data

Sample:	Diacetylchitobiose deacetylase hexamer, 186 kDa Thermococcus chitonophagus protein
Buffer:	20 mM TRIS, 200 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2021 Sep 26

Structural, Thermodynamic and Enzymatic Characterization of N,N-Diacetylchitobiose Deacetylase from Pyrococcus chitonophagus. Int J Mol Sci 23(24) (2022)
...Mohammed ASA, Svergun DI, Rypniewski W

R_g^Guinier	3.6	nm
D_max	11.2	nm
Volume^Porod	317	nm³

SASDMB9 – Diacetylchitobiose deacetylase (oligomeric mixture of hexamers and dodecamers)

Sample:	Diacetylchitobiose deacetylase , 185 kDa Thermococcus chitonophagus protein
Buffer:	20 mM TRIS, 200 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2021 Sep 26

R_g^Guinier

3.9

SASDDY9 – Protein translocase subunit SecA (full length, amino acids 1-901)

Protein translocase subunit SecA experimental SAS data

Protein translocase subunit SecA Kratky plot

Sample:	Protein translocase subunit SecA dimer, 204 kDa Escherichia coli protein
Buffer:	20mM HEPES, 100mM NaCl, 1mM TCEP, pH: 8
Experiment:	SAXS data collected at BM29, ESRF on 2016 Jul 18

The C-terminal tail of the bacterial translocation ATPase SecA modulates its activity. Elife 8 (2019)
...Mohammed F, Rahman KF, Wynne M, Hughes GW, Kramer G, Bukau B, Huber D

R_g^Guinier	4.2	nm
D_max	14.9	nm
Volume^Porod	424	nm³

SASDDZ9 – Protein translocase subunit SecA (amino acids 1-880)

Sample:	Protein translocase subunit SecA dimer, 199 kDa Escherichia coli protein
Buffer:	20mM HEPES, 100mM NaCl, 1mM TCEP, pH: 8
Experiment:	SAXS data collected at BM29, ESRF on 2016 Jul 18

The C-terminal tail of the bacterial translocation ATPase SecA modulates its activity. Elife 8 (2019)
...Mohammed F, Rahman KF, Wynne M, Hughes GW, Kramer G, Bukau B, Huber D

R_g^Guinier	4.2	nm
D_max	14.8	nm
Volume^Porod	380	nm³

SASDE22 – Protein translocase subunit SecA (amino acids 1-832)

Sample:	Protein translocase subunit SecA dimer, 189 kDa Escherichia coli protein
Buffer:	20mM HEPES, 100mM NaCl, 1mM TCEP, pH: 8
Experiment:	SAXS data collected at BM29, ESRF on 2016 Jul 18

The C-terminal tail of the bacterial translocation ATPase SecA modulates its activity. Elife 8 (2019)
...Mohammed F, Rahman KF, Wynne M, Hughes GW, Kramer G, Bukau B, Huber D

R_g^Guinier	4.5	nm
D_max	15.7	nm
Volume^Porod	398	nm³