Search

  
Advanced search  

13 hits found for Mylonas

SASDNC2 – NNGH-inhibited, cadmium(II)-substituted Phe171Asp/Glu219Ala double mutant of FL-MMP- 12

Macrophage metalloelastase experimental SAS data
NNGH-inhibited, cadmium(II)-substituted Phe171Asp/Glu219Ala double mutant of FL-MMP- 12 Rg histogram
Sample: Macrophage metalloelastase monomer, 54 kDa Homo sapiens protein
Buffer: 20 mM Tris10 mM CaCl2, 0.3 M NaCl, 0.2 M AHA, pH: 7.2
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2007 Oct 2
Evidence of Reciprocal Reorientation of the Catalytic and Hemopexin-Like Domains of Full-Length MMP-12 Journal of the American Chemical Society 130(22):7011-7021 (2008)
...Mylonas E, Svergun D
RgGuinier 3.2 nm
Dmax 11.0 nm
VolumePorod 58 nm3

SASDN63 – Microtubule affinity regulating kinase (isoform MARK2, T208E point mutant)

Serine/threonine-protein kinase MARK2 experimental SAS data
CUSTOM IN-HOUSE model
Sample: Serine/threonine-protein kinase MARK2 monomer, 36 kDa Homo sapiens protein
Buffer: 0.1 M Bis-Tris, 0.2 M ammonium citrate, 1mM DTT, pH: 6.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2006 May 16
Structural Variations in the Catalytic and Ubiquitin-associated Domains of Microtubule-associated Protein/Microtubule Affinity Regulating Kinase (MARK) 1 and MARK2 Journal of Biological Chemistry 281(37):27586-27599 (2006)
...Mylonas E, Svergun D, Mandelkow E, Mandelkow E
RgGuinier 2.4 nm
Dmax 8.0 nm
VolumePorod 61 nm3

SASDN73 – Microtubule affinity regulating kinase (isoform MARK2, wild type)

Serine/threonine-protein kinase MARK2 experimental SAS data
CUSTOM IN-HOUSE model
Sample: Serine/threonine-protein kinase MARK2 monomer, 36 kDa Homo sapiens protein
Buffer: 0.1 M Bis-Tris, 0.2 M ammonium citrate, 1mM DTT, pH: 6.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2006 May 16
Structural Variations in the Catalytic and Ubiquitin-associated Domains of Microtubule-associated Protein/Microtubule Affinity Regulating Kinase (MARK) 1 and MARK2 Journal of Biological Chemistry 281(37):27586-27599 (2006)
...Mylonas E, Svergun D, Mandelkow E, Mandelkow E
RgGuinier 2.3 nm
Dmax 8.0 nm
VolumePorod 62 nm3

SASDN83 – Microtubule affinity regulating kinase (isoform MARK1)

Serine/threonine-protein kinase MARK1 experimental SAS data
CUSTOM IN-HOUSE model
Sample: Serine/threonine-protein kinase MARK1 monomer, 37 kDa Homo sapiens protein
Buffer: 0.1 M Bis-Tris, 0.2 M ammonium citrate, 1mM DTT, pH: 6.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2006 May 16
Structural Variations in the Catalytic and Ubiquitin-associated Domains of Microtubule-associated Protein/Microtubule Affinity Regulating Kinase (MARK) 1 and MARK2 Journal of Biological Chemistry 281(37):27586-27599 (2006)
...Mylonas E, Svergun D, Mandelkow E, Mandelkow E
RgGuinier 2.3 nm
Dmax 8.0 nm
VolumePorod 64 nm3

SASDEM4 – HrpG/HrpV/HrpJ gatekeeper complex from Erwinia amylovora

Type III secretion protein HrpGType III secretion protein HrpVHypersensitivity response secretion protein HrpJ experimental SAS data
CORAL model
Sample: Type III secretion protein HrpG , 19 kDa Erwinia amylovora protein
Type III secretion protein HrpV , 13 kDa Erwinia amylovora protein
Hypersensitivity response secretion protein HrpJ , 42 kDa Erwinia amylovora protein
Buffer: 20mM Tris-Cl, pH 8.0, 100mM NaCl, 2mM DTT, 0.5mM EDTA, pH: 8
Experiment: SAXS data collected at SWING, SOLEIL on 2016 Apr 3
Migration of Type III Secretion System Transcriptional Regulators Links Gene Expression to Secretion. MBio 9(4) (2018)
...Mylonas E, Pozidis C, Sabarit B, Anagnostou D, Psatha K, Aivaliotis M, Beuzon CR, Panopoulos NJ, Kokkinidis M
RgGuinier 4.0 nm
Dmax 16.0 nm

SASDQR4 – Escherichia coli 6S RNA

6S RNA (SsrS gene) experimental SAS data
Escherichia coli 6S RNA Rg histogram
Sample: 6S RNA (SsrS gene) monomer, 59 kDa Escherichia coli RNA
Buffer: 20 mM Tris-HCl, 200 mM KCl, 5 mM MgCl2, pH: 8
Experiment: SAXS data collected at SWING, SOLEIL on 2016 Apr 4
Probing the conformational changes of in vivo overexpressed cell cycle regulator 6S ncRNA Frontiers in Molecular Biosciences 10 (2023)
...Mylonas E, Fadouloglou V
RgGuinier 6.1 nm
Dmax 24.0 nm
VolumePorod 175 nm3

SASDQS4 – Escherichia coli 6S:pRNA complex

6S RNA (SsrS gene)product RNA from E. coli 6S experimental SAS data
Escherichia coli 6S:pRNA complex Rg histogram
Sample: 6S RNA (SsrS gene) monomer, 59 kDa Escherichia coli RNA
product RNA from E. coli 6S monomer, 7 kDa Escherichia coli RNA
Buffer: 20 mM Tris-HCl, 200 mM KCl, 5 mM MgCl2, pH: 8
Experiment: SAXS data collected at SWING, SOLEIL on 2016 Apr 4
Probing the conformational changes of in vivo overexpressed cell cycle regulator 6S ncRNA Frontiers in Molecular Biosciences 10 (2023)
...Mylonas E, Fadouloglou V
RgGuinier 4.9 nm
Dmax 20.0 nm
VolumePorod 260 nm3

SASDKQ9 – Chaperone protein IpgC, symmetric dimer from Shigella flexneri

Chaperone protein IpgC experimental SAS data
CORAL model
Sample: Chaperone protein IpgC dimer, 39 kDa Shigella flexneri protein
Buffer: 20 mM HEPES, 100 mM NaCl, pH: 7.4
Experiment: SAXS data collected at BM29, ESRF on 2012 Dec 10
Structural Insights of Shigella Translocator IpaB and Its Chaperone IpgC in Solution Frontiers in Cellular and Infection Microbiology 11 (2021)
...Mylonas E, Gazi A
RgGuinier 2.7 nm
Dmax 9.0 nm
VolumePorod 56 nm3

SASDKR9 – The chaperone protein IpgC/invasin IpaB heterodimer complex from Shigella flexneri

T3SS Chaperone protein IpgCInvasin IpaB experimental SAS data
EOM/RANCH model
Sample: T3SS Chaperone protein IpgC monomer, 20 kDa Shigella flexneri protein
Invasin IpaB monomer, 62 kDa Shigella flexneri protein
Buffer: 20 mM HEPES, 100 mM NaCl, pH: 7.4
Experiment: SAXS data collected at BM29, ESRF on 2012 Dec 10
Structural Insights of Shigella Translocator IpaB and Its Chaperone IpgC in Solution Frontiers in Cellular and Infection Microbiology 11 (2021)
...Mylonas E, Gazi A
RgGuinier 3.9 nm
Dmax 14.0 nm
VolumePorod 165 nm3

SASDAA8 – Chymotrypsinogen A in Tris/HCl

Chymotrypsinogen A experimental SAS data
CRYSOL model
Sample: Chymotrypsinogen A monomer, 26 kDa Bos taurus protein
Buffer: 100 mM Tris/HCl 100 mM NaCl, pH: 7.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2006 May 19
Accuracy of molecular mass determination of proteins in solution by small-angle X-ray scattering Journal of Applied Crystallography 40(s1):s245-s249 (2007)
Mylonas E, Svergun D
RgGuinier 1.9 nm
Dmax 5.0 nm

SASDA78 – Carbonic Anhydrase in Tris/HCl

Carbonic anhydrase 2 experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Carbonic anhydrase 2 monomer, 29 kDa Bos taurus protein
Buffer: 100 mM Tris/HCl 100 mM NaCl, pH: 7.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2006 May 19
Accuracy of molecular mass determination of proteins in solution by small-angle X-ray scattering Journal of Applied Crystallography 40(s1):s245-s249 (2007)
Mylonas E, Svergun D
RgGuinier 2.1 nm
Dmax 6.0 nm

SASDA68 – Aldolase in Tris/HCl

Fructose-bisphosphate aldolase A experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Fructose-bisphosphate aldolase A tetramer, 157 kDa Oryctolagus cuniculus protein
Buffer: 100 mM Tris/HCl 100 mM NaCl, pH: 7.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2006 May 19
Accuracy of molecular mass determination of proteins in solution by small-angle X-ray scattering Journal of Applied Crystallography 40(s1):s245-s249 (2007)
Mylonas E, Svergun D
RgGuinier 3.6 nm
Dmax 10.5 nm

SASDA98 – Thyroglobulin in Tris/HCl

Thyroglobulin experimental SAS data
DAMMIN model
Sample: Thyroglobulin dimer, 606 kDa Bos taurus protein
Buffer: 100 mM Tris/HCl 100 mM NaCl, pH: 7.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2006 May 19
Accuracy of molecular mass determination of proteins in solution by small-angle X-ray scattering Journal of Applied Crystallography 40(s1):s245-s249 (2007)
Mylonas E, Svergun D
RgGuinier 7.9 nm
Dmax 24.0 nm