Small Angle Scattering Biological Data Bank SASBDB

Browse by MODEL: Ab initio only

SASDM87 – Mouse ProNGF - pro-form of the NGF (nerve growth factor)

Mouse ProNGF - pro-form of the NGF (nerve growth factor) experimental SAS data

Sample:	Mouse ProNGF - pro-form of the NGF (nerve growth factor) dimer, 100 kDa Mus musculus protein
Buffer:	50 mM Na-phosphate, pH: 7
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2005 Jul 18

Structural and functional properties of mouse proNGF. Biochem Soc Trans 34(Pt 4):605-6 (2006)
Paoletti F, Konarev PV, Covaceuszach S, Schwarz E, Cattaneo A, Lamba D, Svergun DI

R_g^Guinier	3.0	nm
D_max	11.0	nm
Volume^Porod	97	nm³

SASDM77 – Full-length polypyrimidine tract binding protein (PTB)

Polypyrimidine tract-binding protein 2 experimental SAS data

Sample:	Polypyrimidine tract-binding protein 2 monomer, 57 kDa Homo sapiens protein
Buffer:	25 mM Tris, 250 mM NaCl, 2 mM DTT, pH: 7.2
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2004 Feb 11

Structure and RNA interactions of the N-terminal RRM domains of PTB. Structure 12(9):1631-43 (2004)
Simpson PJ, Monie TP, Szendröi A, Davydova N, Tyzack JK, Conte MR, Read CM, Cary PD, Svergun DI, Konarev PV, Curry S, Matthews S

R_g^Guinier	4.0	nm
D_max	14.0	nm
Volume^Porod	117	nm³

SASDLB7 – Procollagen C-proteinase enhancer

Procollagen C-endopeptidase enhancer 1 experimental SAS data

Sample:	Procollagen C-endopeptidase enhancer 1 monomer, 46 kDa Homo sapiens protein
Buffer:	20 mM Hepes, 500 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2002 Jul 9

Low Resolution Structure Determination Shows Procollagen C-Proteinase Enhancer to be an Elongated Multidomain Glycoprotein Journal of Biological Chemistry 278(9):7199-7205 (2003)
Bernocco S, Steiglitz B, Svergun D, Petoukhov M, Ruggiero F, Ricard-Blum S, Ebel C, Geourjon C, Deléage G, Font B, Eichenberger D, Greenspan D, Hulmes D

R_g^Guinier	4.1	nm
D_max	15.0	nm
Volume^Porod	117	nm³

SASDNF8 – LARGE xylosyl- and glucuronyltransferase 1 (LARGE1dTM) dimer

Xylosyl- and glucuronyltransferase LARGE1 experimental SAS data

Sample:	Xylosyl- and glucuronyltransferase LARGE1 dimer, 179 kDa Homo sapiens protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Mar 18

LARGE1 Processively Polymerizes Matriglycan Using Active Sites on Alternate Protomers SSRN Electronic Journal ()
Joseph S, Schnicker N, Xu Z, Yang T, Hopkins J, Watkins M, Chakravarthy S, Davulcu O, Anderson M, Venzke D, Campbell K

R_g^Guinier	4.4	nm
D_max	18.4	nm
Volume^Porod	264	nm³

SASDNG8 – LARGE xylosyl- and glucuronyltransferase 1 (LARGE1dTM) dimer treated with PNGase F enzyme

Sample:	Xylosyl- and glucuronyltransferase LARGE1 dimer, 179 kDa Homo sapiens protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Mar 18

R_g^Guinier	4.3	nm
D_max	18.0	nm

SASDNH8 – Xylosyl- and glucuronyltransferase LARGE2 (LARGE2dTM) dimer

Xylosyl- and glucuronyltransferase LARGE2 experimental SAS data

Sample:	Xylosyl- and glucuronyltransferase LARGE2 dimer, 168 kDa Mus musculus protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Mar 18

R_g^Guinier	4.2	nm
D_max	16.5	nm

SASDNJ8 – Xylosyl- and glucuronyltransferase LARGE2 (LARGE2dTM) dimer treated with PNGase F enzyme

Sample:	Xylosyl- and glucuronyltransferase LARGE2 dimer, 168 kDa Mus musculus protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Mar 18

R_g^Guinier	4.1	nm
D_max	15.9	nm
Volume^Porod	231	nm³

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