Small Angle Scattering Biological Data Bank SASBDB

SASDS66 – Solution conformation of Harpin HrpZ2 protein from Pseudomonas syringae, a plant pathogen

Sample:	Harpin Z2 monomer, 37 kDa Pseudomonas syringae strain … protein
Buffer:	10 mM MES, 100 mM NaF, pH: 6.2
Experiment:	SAXS data collected at Rigaku BioSAXS-2000, Centre for Cellular and Molecular Biology on 2023 May 1

Solution conformation of HrpZ2 protein from Pseudomonas syringae
Arpita Goswami

R_g^Guinier	3.1	nm
D_max	8.8	nm
Volume^Porod	64	nm³

SASDS37 – Oligomerization initiating solution conformation of Harpin HrpZ2 protein from Pseudomonas syringae, a plant pathogen

Sample:	Harpin Z2 monomer, 37 kDa Pseudomonas syringae strain … protein
Buffer:	10 mM MES, 100 mM NaF, pH: 6.2
Experiment:	SAXS data collected at Rigaku BioSAXS-2000, Centre for Cellular and Molecular Biology on 2023 May 1

Solution conformation of HrpZ2 protein from Pseudomonas syringae
Arpita Goswami

R_g^Guinier	3.2	nm
D_max	11.4	nm
Volume^Porod	70	nm³

SASDU88 – SEC-SAXS of the fusion protein MPB-MabR(Rv2242) - monomeric peak

Maltose/maltodextrin-binding periplasmic protein (D108A, K109A, E198A, N199A, K265A)Uncharacterized protein Rv2242 experimental SAS data

Sample:	Maltose/maltodextrin-binding periplasmic protein (D108A, K109A, E198A, N199A, K265A) monomer, 40 kDa Escherichia coli (strain … protein Uncharacterized protein Rv2242 monomer, 43 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	50 mM Tris pH 7.5, 150 mM NaCl, pH:
Experiment:	SAXS data collected at SWING, SOLEIL on 2024 Apr 3

Domain architecture of the Mycobacterium tuberculosis MabR (Rv2242), a member of the PucR transcription factor family Heliyon :e40494 (2024)
Megalizzi V, Tanina A, Grosse C, Mirgaux M, Legrand P, Mirandela G, Wohlkönig A, Bifani P, Wintjens R

R_g^Guinier	2.8	nm
D_max	8.5	nm
Volume^Porod	113	nm³

SASDU98 – SEC-SAXS of the fusion protein MPB-MabR(Rv2242) - dimeric peak

Sample:	Maltose/maltodextrin-binding periplasmic protein (D108A, K109A, E198A, N199A, K265A) dimer, 80 kDa Escherichia coli (strain … protein Uncharacterized protein Rv2242 dimer, 86 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	50 mM Tris pH 7.5, 150 mM NaCl, pH:
Experiment:	SAXS data collected at SWING, SOLEIL on 2024 Apr 3

R_g^Guinier	3.7	nm
D_max	10.8	nm
Volume^Porod	345	nm³

SASDUA8 – SEC-SAXS of the fusion protein MPB-MabR(Rv2242) - tetrameric peak

Sample:	Maltose/maltodextrin-binding periplasmic protein (D108A, K109A, E198A, N199A, K265A) tetramer, 161 kDa Escherichia coli (strain … protein Uncharacterized protein Rv2242 tetramer, 171 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	50 mM Tris pH 7.5, 150 mM NaCl, pH:
Experiment:	SAXS data collected at SWING, SOLEIL on 2024 Apr 3

R_g^Guinier	5.2	nm
D_max	15.8	nm
Volume^Porod	826	nm³

SASDCP8 – Ras-related protein Rab-1A

Ras-related protein Rab-1A experimental SAS data

Sample:	Ras-related protein Rab-1A monomer, 24 kDa Homo sapiens protein
Buffer:	300 mM NaCl, 2 mM 2-mercaptoethanol and 30 mM Tris-HCl, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2015 Nov 17

The SAXS Analysis of the human GTPase Rab1a
Wenhua Zhang

R_g^Guinier	2.4	nm
D_max	10.2	nm
Volume^Porod	36	nm³

SASDCN8 – SAXS data of Legionella pneumophila phosphocholine hydrolase Lem3(19-570)

Phosphocholine hydrolase Lem3 experimental SAS data

Phosphocholine hydrolase Lem3 Kratky plot

Sample:	Phosphocholine hydrolase Lem3 monomer, 63 kDa Legionella pneumophila subsp. … protein
Buffer:	300 mM NaCl, 2 mM 2-mercaptoethanol and 30 mM Tris-HCl, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2015 Sep 20

The structural analysis of dephosphocholinase Legionella pneumophila Lem3
Wenhua Zhang

R_g^Guinier	3.5	nm
D_max	12.2	nm
Volume^Porod	95	nm³

SASDTW8 – Staphylococcus aureus Fatty Acid Kinase A

Uncharacterized protein SAUSA300_1119 experimental SAS data

Sample:	Uncharacterized protein SAUSA300_1119 dimer, 125 kDa Staphylococcus aureus (strain … protein
Buffer:	50 mM Tris, 150 mM KCl, 1 mM TCEP, 5% glycerol, pH: 7.4
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Oct 5

Molecular insights into the structure and function of the Staphylococcus aureus fatty acid kinase. J Biol Chem 300(12):107920 (2024)
Myers MJ, Xu Z, Ryan BJ, DeMars ZR, Ridder MJ, Johnson DK, Krute CN, Flynn TS, Kashipathy MM, Battaile KP, Schnicker N, Lovell S, Freudenthal BD, Bose JL

R_g^Guinier	4.3	nm
D_max	16.0	nm
Volume^Porod	219	nm³

SASDV75 – S9 carboxypeptidase from Bacillus subtilis (4 mg/ml)

Putative acylaminoacyl-peptidase experimental SAS data

Sample:	Putative acylaminoacyl-peptidase tetramer, 293 kDa Bacillus spizizenii (strain … protein
Buffer:	10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment:	SAXS data collected at BL-18, INDUS-2 on 2024 Mar 18

Structural adaptations for carboxypeptidase activity in putative S9 acylaminoacyl peptidase from Bacillus subtilis. Int J Biol Macromol :136734 (2024)
Chandravanshi K, Singh R, Kumar A, Bhange GN, Kumar A, Makde RD

R_g^Guinier	5.2	nm
D_max	15.9	nm
Volume^Porod	439	nm³

SASDV85 – S9 carboxypeptidase from Bacillus subtilis (6 mg/ml)

Sample:	Putative acylaminoacyl-peptidase tetramer, 293 kDa Bacillus spizizenii (strain … protein
Buffer:	10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment:	SAXS data collected at BL-18, INDUS-2 on 2024 Mar 18

R_g^Guinier	5.2	nm
D_max	14.7	nm
Volume^Porod	435	nm³

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