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37 hits found for Ruiz

SASDE32 – Mothers against decapentaplegic homolog 5 - Smad5 MH1

Mothers against decapentaplegic homolog 5 experimental SAS data
Mothers against decapentaplegic homolog 5 Kratky plot
Sample: Mothers against decapentaplegic homolog 5 , 15 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2018 Feb 14
Unveiling the dimer/monomer propensities of Smad MH1-DNA complexes (2019)
Ruiz L, Kaczmarska Z, Gomes T, Aragón E, Torner C, Freier R, Bagiński B, Martin-Malpartida P, de Martin Garrido N, Márquez J, Cordeiro T, Pluta R, Macias M
RgGuinier 1.9 nm
Dmax 6.6 nm
VolumePorod 32 nm3

SASDE42 – Mothers against decapentaplegic homolog 8_9 - Smad8_9 MH1

Mothers against decapentaplegic homolog 8_9 experimental SAS data
Mothers against decapentaplegic homolog 8_9 Kratky plot
Sample: Mothers against decapentaplegic homolog 8_9 , 15 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2018 Mar 1
Unveiling the dimer/monomer propensities of Smad MH1-DNA complexes (2019)
Ruiz L, Kaczmarska Z, Gomes T, Aragón E, Torner C, Freier R, Bagiński B, Martin-Malpartida P, de Martin Garrido N, Márquez J, Cordeiro T, Pluta R, Macias M
RgGuinier 1.9 nm
Dmax 6.5 nm
VolumePorod 34 nm3

SASDLA2 – Mothers against decapentaplegic homolog 2, SMAD2 phosphomimetic mutant 0.5 mg/ml

Mothers against decapentaplegic homolog 2 (C-terminus phosphomimetic mutant) experimental SAS data
Mothers against decapentaplegic homolog 2 (C-terminus phosphomimetic mutant) Kratky plot
Sample: Mothers against decapentaplegic homolog 2 (C-terminus phosphomimetic mutant) , 53 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Apr 4
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 5.1 nm
Dmax 20.0 nm

SASDLB2 – Mothers against decapentaplegic homolog 2, SMAD2 phosphomimetic mutant 1 mg/ml

Mothers against decapentaplegic homolog 2 (C-terminus phosphomimetic mutant) experimental SAS data
Mothers against decapentaplegic homolog 2 (C-terminus phosphomimetic mutant) Kratky plot
Sample: Mothers against decapentaplegic homolog 2 (C-terminus phosphomimetic mutant) , 53 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Apr 4
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 5.2 nm
Dmax 20.0 nm

SASDLC2 – Mothers against decapentaplegic homolog 2, SMAD2 phosphomimetic mutant 1.5 mg/ml

Mothers against decapentaplegic homolog 2 (C-terminus phosphomimetic mutant) experimental SAS data
Mothers against decapentaplegic homolog 2 (C-terminus phosphomimetic mutant) Kratky plot
Sample: Mothers against decapentaplegic homolog 2 (C-terminus phosphomimetic mutant) , 53 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Apr 4
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 5.3 nm
Dmax 20.0 nm

SASDPY2 – SARS-CoV-2 non-structural protein 7-8 (nsp7-8) polyprotein monomer

Replicase polyprotein 1ab experimental SAS data
DAMMIF model
Sample: Replicase polyprotein 1ab monomer, 31 kDa Severe acute respiratory … protein
Buffer: 50 mM Tris, 500 mM NaCl, 5% glycerol, and 1 mM TCEP, pH: 8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Oct 15
Biochemical and structural insights into SARS-CoV-2 polyprotein processing by Mpro. Sci Adv 8(49):eadd2191 (2022)
...Ruiz FX, Griffin PR, Arnold E
RgGuinier 2.5 nm
Dmax 8.8 nm
VolumePorod 50 nm3

SASDPZ2 – SARS-CoV-2 non-structural protein 7-8 (nsp7-8) polyprotein dimer

Replicase polyprotein 1ab experimental SAS data
Replicase polyprotein 1ab Kratky plot
Sample: Replicase polyprotein 1ab dimer, 63 kDa Severe acute respiratory … protein
Buffer: 50 mM Tris, 500 mM NaCl, 5% glycerol, and 1 mM TCEP, pH: 8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Oct 15
Biochemical and structural insights into SARS-CoV-2 polyprotein processing by Mpro. Sci Adv 8(49):eadd2191 (2022)
...Ruiz FX, Griffin PR, Arnold E
RgGuinier 3.3 nm
Dmax 11.8 nm
VolumePorod 110 nm3

SASDP23 – SARS-CoV-2 non-structural protein 7-11 (nsp7-11) polyprotein monomer

Replicase polyprotein 1a experimental SAS data
DAMMIF model
Sample: Replicase polyprotein 1a monomer, 60 kDa Severe acute respiratory … protein
Buffer: 20 mM HEPES, 10% glycerol, 500 mM NaCl, 5 mM DTT, pH: 7.5
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2021 Nov 14
Biochemical and structural insights into SARS-CoV-2 polyprotein processing by Mpro. Sci Adv 8(49):eadd2191 (2022)
...Ruiz FX, Griffin PR, Arnold E
RgGuinier 3.5 nm
Dmax 15.6 nm
VolumePorod 102 nm3

SASDP33 – SARS-CoV-2 non-structural protein 7-11 (nsp7-11) polyprotein dimer

Replicase polyprotein 1a experimental SAS data
Replicase polyprotein 1a Kratky plot
Sample: Replicase polyprotein 1a dimer, 119 kDa Severe acute respiratory … protein
Buffer: 20 mM HEPES, 10% glycerol, 500 mM NaCl, 5 mM DTT, pH: 7.5
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2021 Nov 14
Biochemical and structural insights into SARS-CoV-2 polyprotein processing by Mpro. Sci Adv 8(49):eadd2191 (2022)
...Ruiz FX, Griffin PR, Arnold E
RgGuinier 4.6 nm
Dmax 19.1 nm
VolumePorod 203 nm3

SASDBC3 – RepB, the replication initiator protein of a promiscuous Streptococcal plasmid pMV158

Replication initiator protein of a promiscuous streptococcal plasmid pMV158. experimental SAS data
NONE model
Sample: Replication initiator protein of a promiscuous streptococcal plasmid pMV158. hexamer, Streptococcus sp. protein
Buffer: 10 mM TRIS 5 mM EDTA 1.0 M KCl, pH: 8.5
Experiment: SAXS data collected at EMBL X33, DORIS III, DESY on 2007 Jun 16
Conformational plasticity of RepB, the replication initiator protein of promiscuous streptococcal plasmid pMV158. Sci Rep 6:20915 (2016)
...Ruiz-Masó JA, Rueda M, Petoukhov MV, Machón C, Svergun DI, Orozco M, del Solar G, Coll M
RgGuinier 3.8 nm
Dmax 10.6 nm
VolumePorod 282 nm3

SASDG35 – Mothers against decapentaplegic homolog 2, S2MH1E3

Mothers against decapentaplegic homolog 2 experimental SAS data
Mothers against decapentaplegic homolog 2 Kratky plot
Sample: Mothers against decapentaplegic homolog 2 monomer, 19 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2015 Jul 2
Structural basis for distinct roles of SMAD2 and SMAD3 in FOXH1 pioneer-directed TGF-β signaling. Genes Dev 33(21-22):1506-1524 (2019)
...Ruiz L, Kaczmarska Z, Su J, Torner C, Tian L, Hu J, Shu W, Agrawal S, Gomes T, Márquez JA, Hadjantonakis AK, Macias MJ, Massagué J
RgGuinier 1.9 nm
Dmax 7.4 nm
VolumePorod 35 nm3

SASDG45 – Mothers against decapentaplegic homolog 2, S2MH1noE3

Mothers against decapentaplegic homolog 2 experimental SAS data
Mothers against decapentaplegic homolog 2 Kratky plot
Sample: Mothers against decapentaplegic homolog 2 monomer, 16 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2015 Jul 2
Structural basis for distinct roles of SMAD2 and SMAD3 in FOXH1 pioneer-directed TGF-β signaling. Genes Dev 33(21-22):1506-1524 (2019)
...Ruiz L, Kaczmarska Z, Su J, Torner C, Tian L, Hu J, Shu W, Agrawal S, Gomes T, Márquez JA, Hadjantonakis AK, Macias MJ, Massagué J
RgGuinier 1.7 nm
Dmax 6.6 nm
VolumePorod 31 nm3

SASDPY5 – Gcf1p protein

Gcf1p experimental SAS data
EOM/RANCH model
Sample: Gcf1p monomer, 26 kDa Candida albicans (strain … protein
Buffer: 50mM Tris, 750mM NaCl, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2017 Oct 10
Structural analysis of the Candida albicans mitochondrial DNA maintenance factor Gcf1p reveals a dynamic DNA-bridging mechanism. Nucleic Acids Res (2023)
...Ruiz-López E, Lyonnais S, Bernadó P, Roca J, Orozco M, Le Cam E, Sedman J, Solà M
RgGuinier 3.7 nm
Dmax 14.5 nm
VolumePorod 80 nm3

SASDPZ5 – Gcf1p protein bound to DNA at 1.0 mg/mL

Gcf1pAf2_20 DNA experimental SAS data
WAXSIS model
Sample: Gcf1p monomer, 26 kDa Candida albicans (strain … protein
Af2_20 DNA monomer, 12 kDa DNA
Buffer: 25 mM Tris, 20 mM NaCl, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2019 Aug 30
Structural analysis of the Candida albicans mitochondrial DNA maintenance factor Gcf1p reveals a dynamic DNA-bridging mechanism. Nucleic Acids Res (2023)
...Ruiz-López E, Lyonnais S, Bernadó P, Roca J, Orozco M, Le Cam E, Sedman J, Solà M
RgGuinier 3.6 nm
Dmax 16.0 nm
VolumePorod 92 nm3

SASDP26 – Gcf1p protein bound to DNA at 2.0 mg/mL

Gcf1pAf2_20 DNA experimental SAS data
WAXSIS model
Sample: Gcf1p monomer, 26 kDa Candida albicans (strain … protein
Af2_20 DNA monomer, 12 kDa DNA
Buffer: 25 mM Tris, 20 mM NaCl, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2019 Aug 30
Structural analysis of the Candida albicans mitochondrial DNA maintenance factor Gcf1p reveals a dynamic DNA-bridging mechanism. Nucleic Acids Res (2023)
...Ruiz-López E, Lyonnais S, Bernadó P, Roca J, Orozco M, Le Cam E, Sedman J, Solà M
RgGuinier 3.9 nm
Dmax 16.0 nm
VolumePorod 133 nm3

SASDP36 – N-terminal truncated Gcf1p (amino acids 59-245) bound to DNA

Af2_20 DNAGcf1p(Δ58) experimental SAS data
OTHER model
Sample: Af2_20 DNA monomer, 12 kDa DNA
Gcf1p(Δ58) monomer, 22 kDa Candida albicans (strain … protein
Buffer: 25 mM Tris, 20 mM NaCl, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2019 Aug 30
Structural analysis of the Candida albicans mitochondrial DNA maintenance factor Gcf1p reveals a dynamic DNA-bridging mechanism. Nucleic Acids Res (2023)
...Ruiz-López E, Lyonnais S, Bernadó P, Roca J, Orozco M, Le Cam E, Sedman J, Solà M
RgGuinier 2.6 nm
Dmax 10.5 nm
VolumePorod 52 nm3

SASDKF6 – C2AB construct of synaptotagmin-1 (SYT1) with E395-397A mutations at the linker

Synaptotagmin-1 experimental SAS data
CORAL model
Sample: Synaptotagmin-1 monomer, 33 kDa Arabidopsis thaliana protein
Buffer: 50 mM Tris, 50 mM NaCl, pH: 8
Experiment: SAXS data collected at B21, Diamond Light Source on 2020 Jun 11
The structure and flexibility analysis of the Arabidopsis synaptotagmin 1 reveal the basis of its regulation at membrane contact sites Life Science Alliance 4(10):e202101152 (2021)
...Ruiz-López N, Botella M, Sánchez-Barrena M, Albert A
RgGuinier 3.1 nm
Dmax 12.1 nm
VolumePorod 59 nm3

SASDKG6 – SMP2C2A construct of synaptotagmin-1 (SYT1)

Synaptotagmin-1 (SYT1-SMP2C2A) experimental SAS data
MULTIFOXS model
Sample: Synaptotagmin-1 (SYT1-SMP2C2A) monomer, 72 kDa Escherichia coli protein
Buffer: 20 mM Tris, 100 mM NaCl, 5% glycerol, 2 mM DTT, pH: 8
Experiment: SAXS data collected at B21, Diamond Light Source on 2020 Jun 11
The structure and flexibility analysis of the Arabidopsis synaptotagmin 1 reveal the basis of its regulation at membrane contact sites Life Science Alliance 4(10):e202101152 (2021)
...Ruiz-López N, Botella M, Sánchez-Barrena M, Albert A
RgGuinier 4.2 nm
Dmax 17.8 nm
VolumePorod 138 nm3

SASDKZ8 – Mothers against decapentaplegic homolog 2, SMAD2, wild-type 0.74 mg/ml

Mothers against decapentaplegic homolog 2 experimental SAS data
Mothers against decapentaplegic homolog 2 Kratky plot
Sample: Mothers against decapentaplegic homolog 2 , 160 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 11
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 3.4 nm
Dmax 15.0 nm

SASDK29 – Mothers against decapentaplegic homolog 2, SMAD2, wild-type 1.3 mg/ml

Mothers against decapentaplegic homolog 2 experimental SAS data
Mothers against decapentaplegic homolog 2 Kratky plot
Sample: Mothers against decapentaplegic homolog 2 , 160 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 11
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 3.8 nm
Dmax 21.0 nm

SASDK39 – Mothers against decapentaplegic homolog 2, SMAD2, wild-type 2.5 mg/ml

Mothers against decapentaplegic homolog 2 experimental SAS data
Mothers against decapentaplegic homolog 2 Kratky plot
Sample: Mothers against decapentaplegic homolog 2 , 160 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 11
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 3.8 nm
Dmax 20.0 nm

SASDK49 – Mothers against decapentaplegic homolog 2, SMAD2, wild-type 3mg/ml

Mothers against decapentaplegic homolog 2 experimental SAS data
Mothers against decapentaplegic homolog 2 Kratky plot
Sample: Mothers against decapentaplegic homolog 2 , 160 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 11
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 4.3 nm
Dmax 23.0 nm

SASDK59 – Mothers against decapentaplegic homolog 2, SMAD2, linker fragment (amino acids 175-262)

Mothers against decapentaplegic homolog 2 (linker) experimental SAS data
Mothers against decapentaplegic homolog 2 (linker) Kratky plot
Sample: Mothers against decapentaplegic homolog 2 (linker) monomer, 10 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 11
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 2.9 nm
Dmax 14.0 nm
VolumePorod 20 nm3

SASDK69 – Mothers against decapentaplegic homolog 2, SMAD2, linker-MH2 fragment (amino acids 186-467) 0.5 mg/ml

Mothers against decapentaplegic homolog 2 (linker-MH2) experimental SAS data
Mothers against decapentaplegic homolog 2 (linker-MH2) Kratky plot
Sample: Mothers against decapentaplegic homolog 2 (linker-MH2) , 99 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 11
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 3.6 nm
Dmax 15.0 nm

SASDK79 – Mothers against decapentaplegic homolog 2, SMAD2, linker-MH2 fragment (amino acids 186-467) 1.1 mg/ml

Mothers against decapentaplegic homolog 2 (linker-MH2) experimental SAS data
Mothers against decapentaplegic homolog 2 (linker-MH2) Kratky plot
Sample: Mothers against decapentaplegic homolog 2 (linker-MH2) , 99 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 11
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 3.7 nm
Dmax 17.0 nm

SASDK89 – Mothers against decapentaplegic homolog 2, SMAD2, linker-MH2 fragment (amino acids 186-467) 2.2 mg/ml

Mothers against decapentaplegic homolog 2 (linker-MH2) experimental SAS data
Mothers against decapentaplegic homolog 2 (linker-MH2) Kratky plot
Sample: Mothers against decapentaplegic homolog 2 (linker-MH2) , 99 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 11
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 4.2 nm
Dmax 19.0 nm

SASDK99 – Mothers against decapentaplegic homolog 2, SMAD2, C-terminus deletion (Δ461-467) 1 mg/ml

Mothers against decapentaplegic homolog 2 (C-terminus deletion) experimental SAS data
Mothers against decapentaplegic homolog 2 (C-terminus deletion) Kratky plot
Sample: Mothers against decapentaplegic homolog 2 (C-terminus deletion) , 158 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 11
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 4.1 nm
Dmax 17.0 nm

SASDKA9 – Mothers against decapentaplegic homolog 2, SMAD2, C-terminus deletion (Δ461-467) 2 mg/ml

Mothers against decapentaplegic homolog 2 (C-terminus deletion) experimental SAS data
Mothers against decapentaplegic homolog 2 (C-terminus deletion) Kratky plot
Sample: Mothers against decapentaplegic homolog 2 (C-terminus deletion) , 158 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 11
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 4.3 nm
Dmax 20.0 nm

SASDKB9 – Mothers against decapentaplegic homolog 2, SMAD2, C-terminus deletion (Δ461-467) 3.8 mg/ml

Mothers against decapentaplegic homolog 2 (C-terminus deletion) experimental SAS data
Mothers against decapentaplegic homolog 2 (C-terminus deletion) Kratky plot
Sample: Mothers against decapentaplegic homolog 2 (C-terminus deletion) , 158 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2016 Nov 11
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 4.6 nm
Dmax 22.0 nm

SASDKC9 – Mothers against decapentaplegic homolog 4, SMAD4, wild-type

Mothers against decapentaplegic homolog 4 experimental SAS data
Mothers against decapentaplegic homolog 4 Kratky plot
Sample: Mothers against decapentaplegic homolog 4 monomer, 60 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2015 Nov 4
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 4.4 nm
Dmax 22.0 nm

SASDKD9 – Mothers against decapentaplegic homolog 4, SMAD4, linker fragment (amino acids 141-271)

Mothers against decapentaplegic homolog 4 (linker) experimental SAS data
Mothers against decapentaplegic homolog 4 (linker) Kratky plot
Sample: Mothers against decapentaplegic homolog 4 (linker) monomer, 14 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2015 Apr 20
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 3.7 nm
Dmax 17.5 nm
VolumePorod 45 nm3

SASDKE9 – Mothers against decapentaplegic homolog 4, SMAD4, linker-MH2 fragment (amino acids 150-552)

Mothers against decapentaplegic homolog 4 (linker-MH2) experimental SAS data
Mothers against decapentaplegic homolog 4 (linker-MH2) Kratky plot
Sample: Mothers against decapentaplegic homolog 4 (linker-MH2) monomer, 44 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2015 Apr 20
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 3.3 nm
Dmax 17.0 nm
VolumePorod 80 nm3

SASDKF9 – Mothers against decapentaplegic homolog 4, SMAD4, SADMH2 fragment (amino acids 272-552)

Mothers against decapentaplegic homolog 4 (SADMH2) experimental SAS data
Mothers against decapentaplegic homolog 4 (SADMH2) Kratky plot
Sample: Mothers against decapentaplegic homolog 4 (SADMH2) monomer, 31 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2015 Apr 20
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 2.5 nm
Dmax 9.0 nm
VolumePorod 54 nm3

SASDKG9 – Mothers against decapentaplegic homolog 4, SMAD4, MH2 fragment (amino acids 314-552)

Mothers against decapentaplegic homolog 4 (MH2 Fragment) experimental SAS data
Mothers against decapentaplegic homolog 4 (MH2 Fragment) Kratky plot
Sample: Mothers against decapentaplegic homolog 4 (MH2 Fragment) monomer, 26 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2015 Apr 20
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 2.1 nm
Dmax 8.0 nm

SASDKH9 – Mothers against decapentaplegic homolog 4, SMAD4, MH1 fragment (amino acids 10-140)

Mothers against decapentaplegic homolog 4 (MH1 fragment) experimental SAS data
Mothers against decapentaplegic homolog 4 (MH1 fragment) Kratky plot
Sample: Mothers against decapentaplegic homolog 4 (MH1 fragment) monomer, 15 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7.2
Experiment: SAXS data collected at BM29, ESRF on 2015 Apr 20
Conformational landscape of multidomain SMAD proteins Computational and Structural Biotechnology Journal (2021)
...Ruiz L, Aragón E, Cordeiro T, Macias M
RgGuinier 1.6 nm
Dmax 6.0 nm
VolumePorod 24 nm3

SASDKJ9 – C2AB construct of synaptotagmin-1 (SYT1)

Synaptotagmin-1 experimental SAS data
DAMFILT model
Sample: Synaptotagmin-1 monomer, 33 kDa Arabidopsis thaliana protein
Buffer: 50 mM Tris, 50 mM NaCl, pH: 8
Experiment: SAXS data collected at B21, Diamond Light Source on 2021 Feb 16
The structure and flexibility analysis of the Arabidopsis synaptotagmin 1 reveal the basis of its regulation at membrane contact sites Life Science Alliance 4(10):e202101152 (2021)
...Ruiz-López N, Botella M, Sánchez-Barrena M, Albert A
RgGuinier 2.8 nm
Dmax 12.6 nm
VolumePorod 50 nm3

SASDKK9 – C2AB construct of synaptotagmin-1 (SYT1) in presence of Ca cations

Synaptotagmin-1 experimental SAS data
MULTIFOXS model
Sample: Synaptotagmin-1 monomer, 33 kDa Arabidopsis thaliana protein
Buffer: 50 mM Tris, 50 mM NaCl, pH: 8
Experiment: SAXS data collected at B21, Diamond Light Source on 2021 Feb 16
The structure and flexibility analysis of the Arabidopsis synaptotagmin 1 reveal the basis of its regulation at membrane contact sites Life Science Alliance 4(10):e202101152 (2021)
...Ruiz-López N, Botella M, Sánchez-Barrena M, Albert A
RgGuinier 2.9 nm
Dmax 13.8 nm
VolumePorod 54 nm3