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349 hits found for X33

SASDPZ9 – Lipid_unpublished_1

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jun 24
Lipid_unpublished_1
Siawosch Schewa

SASDQ22 – Lipid_unpublished_2

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jun 25
Lipid_unpublished_2
Siawosch Schewa

SASDA32 – Bovine serum albumin in HEPES

Bovine Serum Albumin experimental SAS data
DAMMIF model
Sample: Bovine Serum Albumin monomer, 69 kDa Bos taurus (Bovine) protein
Buffer: 50 mM HEPES 50 mM KCl, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 12
Standard proteins
Darja Ruskule
RgGuinier 2.9 nm
Dmax 9.3 nm
VolumePorod 97 nm3

SASDC32 – Ethylene Receptor 1 Cytosolic Domain (in 250 mM NDSB)

Ethylene Receptor 1 experimental SAS data
Ethylene Receptor 1 Cytosolic Domain (in 250 mM NDSB) Rg histogram
Sample: Ethylene Receptor 1 dimer, 129 kDa Arabidopsis thaliana protein
Buffer: 20 mM Tris-NDSB 150 mM NaCl 1mM DTT 250 mM NDSB, pH: 8.8
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Mar 19
Structural model of the cytosolic domain of the plant ethylene receptor 1 (ETR1). J Biol Chem 290(5):2644-58 (2015)
Mayerhofer H, Panneerselvam S, Kaljunen H, Tuukkanen A, Mertens HD, Mueller-Dieckmann J
RgGuinier 4.7 nm
Dmax 15.8 nm
VolumePorod 316 nm3

SASDQ32 – Lipid_unpublished_3

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Apr 30
Lipid_unpublished_3
Siawosch Schewa

SASDQ42 – Lipid_unpublished_4

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Apr 30
Lipid_unpublished_4
Siawosch Schewa

SASDA52 – Alcohol dehydrogenase in PBS

Alcohol dehydrogenase 1 experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Alcohol dehydrogenase 1 tetramer, 147 kDa Saccharomyces cerevisiae protein
Buffer: PBS, pH: 7.4
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 20
Standard proteins
Darja Ruskule
RgGuinier 3.2 nm
Dmax 8.9 nm
VolumePorod 178 nm3

SASDC52 – Bruton tyrosine kinase

Tyrosine-protein kinase BTK (R28C mutant) experimental SAS data
GASBOR model
Sample: Tyrosine-protein kinase BTK (R28C mutant) monomer, 76 kDa Homo sapiens protein
Buffer: 20 mM HEPES 200 mM NaCl, 2 mM DTT and 1 mM MgCl2, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2002 Apr 2
Conformation of full-length Bruton tyrosine kinase (Btk) from synchrotron X-ray solution scattering. EMBO J 22(18):4616-24 (2003)
Márquez JA, Smith CI, Petoukhov MV, Lo Surdo P, Mattsson PT, Knekt M, Westlund A, Scheffzek K, Saraste M, Svergun DI
RgGuinier 5.0 nm
Dmax 20.0 nm
VolumePorod 130 nm3

SASDQ52 – Lipid_unpublished_5

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jul 22
Lipid_unpublished_5
Siawosch Schewa

SASDA62 – bAmylase in PBS

Beta-amylase experimental SAS data
DAMMIF model
Sample: Beta-amylase tetramer, 224 kDa Ipomoea batatas protein
Buffer: PBS, pH: 7.4
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 20
Standard proteins
Darja Ruskule
RgGuinier 4.2 nm
Dmax 12.7 nm
VolumePorod 214 nm3

SASDQ62 – Lipid_unpublished_6

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 May 2
Lipid_unpublished_6
Siawosch Schewa

SASDQ72 – Lipid_unpublished_7

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 May 2
Lipid_unpublished_7
Siawosch Schewa

SASDA82 – Apoferritin in PBS and glycerol

Ferritin light chain experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Ferritin light chain 24-mer, 479 kDa Equus caballus protein
Buffer: PBS, 50% Glycerol, 0.076 M NaCl, pH: 7.4
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 20
Standard proteins
Darja Ruskule
RgGuinier 6.8 nm
Dmax 12.8 nm
VolumePorod 619 nm3

SASDF82 – Urokinase plasminogen activator surface receptor, uPAR H47C-N259C, complex with urokinase-type plasminogen activator (Amino Terminal Fragment, ATF).

Urokinase plasminogen activator surface receptorUrokinase-type plasminogen activator (Amino Terminal Fragment) experimental SAS data
DAMMIN model
Sample: Urokinase plasminogen activator surface receptor monomer, 37 kDa Homo sapiens protein
Urokinase-type plasminogen activator (Amino Terminal Fragment) monomer, 16 kDa Homo sapiens protein
Buffer: 20 mM PBS, 5 %(v/v) glycerol, 50 mM NaSO4,, pH: 7.4
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Jun 18
Did evolution create a flexible ligand-binding cavity in the urokinase receptor through deletion of a plesiotypic disulfide bond? J Biol Chem (2019)
Leth JM, Mertens HDT, Leth-Espensen KZ, Jørgensen TJD, Ploug M
RgGuinier 2.6 nm
Dmax 8.2 nm
VolumePorod 102 nm3

SASDQ82 – Lipid_unpublished_8

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 May 2
Lipid_unpublished_8
Siawosch Schewa

SASDA92 – Catalase in PBS

Catalase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Catalase tetramer, 240 kDa Bos taurus protein
Buffer: PBS, pH: 7.4
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 17
Standard proteins
Darja Ruskule
RgGuinier 4.1 nm
Dmax 10.9 nm
VolumePorod 296 nm3

SASDJ92 – S. epidermidis extracellular matrix binding protein (Embp) F-repeats

Extracellular matrix binding protein F-repeats experimental SAS data
SASREF model
Sample: Extracellular matrix binding protein F-repeats , 70 kDa Staphylococcus epidermidis protein
Buffer: 50 mM MES, 150 mM NaCl, pH: 6
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Dec 15
A Giant Extracellular Matrix Binding Protein of Staphylococcus epidermidis Binds Surface-Immobilized Fibronectin via a Novel Mechanism. mBio 11(5) (2020)
Büttner H, Perbandt M, Kohler T, Kikhney A, Wolters M, Christner M, Heise M, Wilde J, Weißelberg S, Both A, Betzel C, Hammerschmidt S, Svergun D, Aepfelbacher M, Rohde H
RgGuinier 7.0 nm
Dmax 28.0 nm

SASDN92 – Apoform of glyceraldehyde-3-phosphate dehydrogenase (apo-kmGAPDH1p)

Glyceraldehyde-3-phosphate dehydrogenase 1 experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Glyceraldehyde-3-phosphate dehydrogenase 1 tetramer, 142 kDa Kluyveromyces marxianus protein
Buffer: 150 mM NaCl, 1 mM beta-mercaptoethanol, 1 mM EDTA, 10 mM TrisHCl, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 Mar 27
The Crystal and Solution Structures of Glyceraldehyde-3-phosphate Dehydrogenase Reveal Different Quaternary Structures Journal of Biological Chemistry 281(44):33433-33440 (2006)
Ferreira-da-Silva F, Pereira P, Gales L, Roessle M, Svergun D, Moradas-Ferreira P, Damas A
RgGuinier 4.2 nm
Dmax 12.0 nm
VolumePorod 234 nm3

SASDQ92 – Lipid_unpublished_9

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 May 1
Lipid_unpublished_9
Siawosch Schewa

SASDAA2 – Conalbumin in PBS

Ovotransferrin experimental SAS data
DAMMIF model
Sample: Ovotransferrin monomer, 78 kDa Gallus gallus protein
Buffer: PBS, pH: 7.4
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 21
Standard proteins
Darja Ruskule
RgGuinier 3.8 nm
Dmax 11.0 nm
VolumePorod 117 nm3

SASDNA2 – Glyceraldehyde-3-phosphate dehydrogenase (apo-kmGAPDH1p) upon NAD+ binding

Glyceraldehyde-3-phosphate dehydrogenase 1 bound to NAD+ experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Glyceraldehyde-3-phosphate dehydrogenase 1 bound to NAD+ tetramer, 142 kDa Kluyveromyces marxianus protein
Buffer: 150 mM NaCl, 1 mM beta-mercaptoethanol, 1 mM EDTA, 10 mM TrisHCl, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 Mar 27
The Crystal and Solution Structures of Glyceraldehyde-3-phosphate Dehydrogenase Reveal Different Quaternary Structures Journal of Biological Chemistry 281(44):33433-33440 (2006)
Ferreira-da-Silva F, Pereira P, Gales L, Roessle M, Svergun D, Moradas-Ferreira P, Damas A
RgGuinier 3.7 nm
Dmax 9.9 nm
VolumePorod 202 nm3

SASDQA2 – Lipid_unpublished_11

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Apr 30
Lipid_unpublished_11
Siawosch Schewa

SASDNB2 – Human NK inhibitory receptor IRp60 with an immunoglobulin-like fold

CMRF35-like molecule 8 experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: CMRF35-like molecule 8 monomer, 12 kDa Homo sapiens protein
Buffer: MES buffer with 3mM DTT, pH: 5.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 Apr 6
Molecular analysis and solution structure from small-angle X-ray scattering of the human natural killer inhibitory receptor IRp60 (CD300a) International Journal of Biological Macromolecules 40(3):193-200 (2007)
Dimasi N, Roessle M, Moran O, Candiano G, Svergun D, Biassoni R
RgGuinier 2.0 nm
Dmax 7.0 nm
VolumePorod 22 nm3

SASDQB2 – Lipid_unpublished_10

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 May 1
Lipid_unpublished_10
Siawosch Schewa

SASDAC2 – Lysozyme in sodium acetate

Lysozyme C experimental SAS data
CRYSOL model
Sample: Lysozyme C monomer, 14 kDa Gallus gallus protein
Buffer: 40 mM Sodium Acetate, pH: 3.8
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 21
Standard proteins
Darja Ruskule
RgGuinier 1.5 nm
Dmax 4.0 nm
VolumePorod 17 nm3

SASDNC2 – NNGH-inhibited, cadmium(II)-substituted Phe171Asp/Glu219Ala double mutant of FL-MMP- 12

Macrophage metalloelastase experimental SAS data
NNGH-inhibited, cadmium(II)-substituted Phe171Asp/Glu219Ala double mutant of FL-MMP- 12 Rg histogram
Sample: Macrophage metalloelastase monomer, 54 kDa Homo sapiens protein
Buffer: 20 mM Tris10 mM CaCl2, 0.3 M NaCl, 0.2 M AHA, pH: 7.2
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2007 Oct 2
Evidence of Reciprocal Reorientation of the Catalytic and Hemopexin-Like Domains of Full-Length MMP-12 Journal of the American Chemical Society 130(22):7011-7021 (2008)
Bertini I, Calderone V, Fragai M, Jaiswal R, Luchinat C, Melikian M, Mylonas E, Svergun D
RgGuinier 3.2 nm
Dmax 11.0 nm
VolumePorod 58 nm3

SASDQC2 – Lipid_unpublished_12

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Apr 30
Lipid_unpublished_12
Siawosch Schewa

SASDED2 – Polyglutamine tract-binding protein 1 (PQBP-1)

Polyglutamine-binding protein 1 experimental SAS data
Polyglutamine tract-binding protein 1 (PQBP-1) Rg histogram
Sample: Polyglutamine-binding protein 1 monomer, 31 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, 1mM DTT,, pH: 7
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Nov 18
Solution model of the intrinsically disordered polyglutamine tract-binding protein-1. Biophys J 102(7):1608-16 (2012)
Rees M, Gorba C, de Chiara C, Bui TT, Garcia-Maya M, Drake AF, Okazawa H, Pastore A, Svergun D, Chen YW
RgGuinier 3.7 nm
Dmax 13.0 nm
VolumePorod 51 nm3

SASDND2 – The monomeric state of b-sandwich cupredoxin Plastocyanin (Pc)

Plastocyanin experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Plastocyanin monomer, 11 kDa Phormidium laminosum protein
Buffer: pure water, pH: 7
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 May 7
Metal-Mediated Self-Assembly of a β-Sandwich Protein Chemistry - A European Journal 15(46):12672-12680 (2009)
Crowley P, Matias P, Khan A, Roessle M, Svergun D
RgGuinier 1.4 nm
Dmax 4.5 nm
VolumePorod 15 nm3

SASDQD2 – Lipid_unpublished_13

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Apr 30
Lipid_unpublished_13
Siawosch Schewa

SASDNE2 – The dimeric state of b-sandwich cupredoxin Plastocyanin (Pc)

Plastocyanin experimental SAS data
REFMAC model
Sample: Plastocyanin dimer, 23 kDa Phormidium laminosum protein
Buffer: pure water, pH: 7
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 May 7
Metal-Mediated Self-Assembly of a β-Sandwich Protein Chemistry - A European Journal 15(46):12672-12680 (2009)
Crowley P, Matias P, Khan A, Roessle M, Svergun D
RgGuinier 2.3 nm
Dmax 8.5 nm
VolumePorod 28 nm3

SASDQE2 – Lipid_unpublished_14

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Mar 10
Lipid_unpublished_14
Siawosch Schewa

SASDQF2 – Lipid_unpublished_15

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jul 25
Lipid_unpublished_15
Siawosch Schewa

SASDAG2 – Lysozyme in sodium acetate

Lysozyme C experimental SAS data
GASBOR model
Sample: Lysozyme C monomer, 14 kDa Gallus gallus protein
Buffer: 40 mM Sodium Acetate, pH: 3.8
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 21
Standard proteins
Darja Ruskule
RgGuinier 1.5 nm
Dmax 4.0 nm
VolumePorod 21 nm3

SASDPG2 – Spiegelmer NOX-E36, 1.15 mg/ml

Spiegelmer NOX-E36 experimental SAS data
MC-FOLD | MC-SYM model
Sample: Spiegelmer NOX-E36 monomer, 13 kDa synthetic construct RNA
Buffer: 20 mM HEPES, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Feb 20
Spiegelmers® NOX-E36 and NOX-A12
Al Kikhney, Bara Schmidt
RgGuinier 2.1 nm
Dmax 8.0 nm
VolumePorod 18 nm3

SASDQG2 – Lipid_unpublished_16

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jul 25
Lipid_unpublished_16
Siawosch Schewa

SASDAH2 – Myoglobin in PBS

Myoglobin experimental SAS data
CRYSOL model
Sample: Myoglobin monomer, 17 kDa Equus caballus protein
Buffer: PBS, pH: 7.4
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 20
Standard proteins
Darja Ruskule
RgGuinier 1.7 nm
Dmax 5.0 nm
VolumePorod 32 nm3

SASDPH2 – Spiegelmer NOX-E36, 4.46 mg/ml

Spiegelmer NOX-E36 experimental SAS data
MC-FOLD | MC-SYM model
Sample: Spiegelmer NOX-E36 monomer, 13 kDa synthetic construct RNA
Buffer: 20 mM HEPES, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Feb 20
Spiegelmers® NOX-E36 and NOX-A12
Al Kikhney, Bara Schmidt
RgGuinier 2.1 nm

SASDQH2 – Lipid_unpublished_17

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jul 25
Lipid_unpublished_17
Siawosch Schewa

SASDPJ2 – Spiegelmer NOX-A12, 1.0 mg/ml

Spiegelmer NOX-A12 experimental SAS data
MC-FOLD | MC-SYM model
Sample: Spiegelmer NOX-A12 monomer, 15 kDa synthetic construct RNA
Buffer: 20 mM HEPES, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Feb 20
Spiegelmers® NOX-E36 and NOX-A12
Al Kikhney, Bara Schmidt
RgGuinier 2.1 nm
Dmax 7.8 nm
VolumePorod 21 nm3

SASDQJ2 – Lipid_unpublished_18

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jul 25
Lipid_unpublished_18
Siawosch Schewa

SASDAK2 – Myoglobin in PBS

Myoglobin experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Myoglobin monomer, 17 kDa Equus caballus protein
Buffer: PBS, pH: 7.4
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 20
Standard proteins
Darja Ruskule
RgGuinier 1.6 nm
Dmax 5.0 nm
VolumePorod 32 nm3

SASDPK2 – Spiegelmer NOX-A12, 3.5 mg/ml

Spiegelmer NOX-A12 experimental SAS data
MC-FOLD | MC-SYM model
Sample: Spiegelmer NOX-A12 monomer, 15 kDa synthetic construct RNA
Buffer: 20 mM HEPES, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Feb 20
Spiegelmers® NOX-E36 and NOX-A12
Al Kikhney, Bara Schmidt
RgGuinier 2.0 nm
Dmax 7.6 nm
VolumePorod 18 nm3

SASDQK2 – Lipid_unpublished_19

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jul 25
Lipid_unpublished_19
Siawosch Schewa

SASDAL2 – Ovalbumin in PBS

Ovalbumin experimental SAS data
DAMMIN model
Sample: Ovalbumin monomer, 43 kDa Gallus gallus protein
Buffer: PBS, pH: 7.4
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 18
Standard proteins
Darja Ruskule
RgGuinier 2.5 nm
Dmax 7.8 nm
VolumePorod 74 nm3

SASDQL2 – Lipid_unpublished_20

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jul 22
Lipid_unpublished_20
Siawosch Schewa

SASDQM2 – Lipid_unpublished_21

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jul 25
Lipid_unpublished_21
Siawosch Schewa

SASDAN2 – Bovine pancreatic ribonuclease A in PBS (WAXS)

Ribonuclease pancreatic experimental SAS data
GASBOR model
Sample: Ribonuclease pancreatic monomer, 16 kDa Bos taurus protein
Buffer: PBS, pH: 7.4
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 18
Standard proteins
Darja Ruskule
RgGuinier 1.6 nm
Dmax 5.0 nm
VolumePorod 15 nm3

SASDNN2 – Experimental SAXS data for hemoglobin conjucted with six-seven copies of PEG dimer (Hb2) at concentration c = 21 mg/ml

Human hemoglobin conjugated with six-seven copies of 5-kDa PEG experimental SAS data
Human hemoglobin conjugated with six-seven copies of 5-kDa PEG Kratky plot
Sample: Human hemoglobin conjugated with six-seven copies of 5-kDa PEG dimer, 62 kDa Homo sapiens protein
Buffer: Ringer's lactate solution, pH: 6.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 Feb 19
Solution Structure of Poly(ethylene) Glycol-Conjugated Hemoglobin Revealed by Small-Angle X-Ray Scattering: Implications for a New Oxygen Therapeutic Biophysical Journal 94(1):173-181 (2008)
Svergun D, Ekström F, Vandegriff K, Malavalli A, Baker D, Nilsson C, Winslow R
RgGuinier 3.0 nm

SASDQN2 – Lipid_unpublished_22

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jul 25
Lipid_unpublished_22
Siawosch Schewa

SASDNP2 – Experimental SAXS data for hemoglobin conjucted with six-seven copies of PEG dimer (Hb5)

Human hemoglobin conjugated with six-seven copies of 5-kDa PEG experimental SAS data
GASBOR model
Sample: Human hemoglobin conjugated with six-seven copies of 5-kDa PEG dimer, 62 kDa Homo sapiens protein
Buffer: Ringer's lactate solution, pH: 6.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 Feb 19
Solution Structure of Poly(ethylene) Glycol-Conjugated Hemoglobin Revealed by Small-Angle X-Ray Scattering: Implications for a New Oxygen Therapeutic Biophysical Journal 94(1):173-181 (2008)
Svergun D, Ekström F, Vandegriff K, Malavalli A, Baker D, Nilsson C, Winslow R
RgGuinier 3.3 nm
Dmax 13.0 nm

SASDQP2 – Lipid_unpublished_23

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jul 10
Lipid_unpublished_23
Siawosch Schewa

SASDAQ2 – Ubiquitin in sodium acetate

Ubiquitin experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Ubiquitin monomer, 9 kDa Bos taurus protein
Buffer: 40 mM Sodium acetate 150 mM NaCl, pH: 5.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 18
Standard proteins
Darja Ruskule
RgGuinier 1.3 nm
Dmax 4.9 nm
VolumePorod 12 nm3

SASDNQ2 – Experimental SAXS data for hemoglobin conjucted with two copies of PEG dimer (Hb2) at concentration c = 25 mg/ml

Human hemoglobin conjugated with two copies of 5-kDa PEG experimental SAS data
Human hemoglobin conjugated with two copies of 5-kDa PEG Kratky plot
Sample: Human hemoglobin conjugated with two copies of 5-kDa PEG dimer, 62 kDa Homo sapiens protein
Buffer: Ringer's lactate solution, pH: 6.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 Feb 19
Solution Structure of Poly(ethylene) Glycol-Conjugated Hemoglobin Revealed by Small-Angle X-Ray Scattering: Implications for a New Oxygen Therapeutic Biophysical Journal 94(1):173-181 (2008)
Svergun D, Ekström F, Vandegriff K, Malavalli A, Baker D, Nilsson C, Winslow R
RgGuinier 2.4 nm

SASDQQ2 – Lipid_unpublished_24

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jul 10
Lipid_unpublished_24
Siawosch Schewa

SASDAR2 – Bovine pancreatic ribonuclease A in PBS

Ribonuclease pancreatic experimental SAS data
DAMMIF model
Sample: Ribonuclease pancreatic monomer, 16 kDa Bos taurus protein
Buffer: PBS, pH: 7.4
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Sep 18
Standard proteins
Darja Ruskule
RgGuinier 1.6 nm
Dmax 5.0 nm
VolumePorod 17 nm3

SASDMR2 – HPMA-Based Nanoparticles with Cholesterol (1.4%)

N-(2-hydroxypropyl)- 31 methacrylamide (HPMA) copolymers with cholesterol 1.4% experimental SAS data
DAMFILT model
Sample: N-(2-hydroxypropyl)- 31 methacrylamide (HPMA) copolymers with cholesterol 1.4% 0, 16272 kDa
Buffer: phosphate buffer saline (PBS) (pH 5.0), pH: 5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Mar 27
Macromolecular HPMA-based nanoparticles with cholesterol for solid-tumor targeting: detailed study of the inner structure of a highly efficient drug delivery system. Biomacromolecules 13(8):2594-604 (2012)
Filippov SK, Chytil P, Konarev PV, Dyakonova M, Papadakis C, Zhigunov A, Plestil J, Stepanek P, Etrych T, Ulbrich K, Svergun DI
RgGuinier 6.2 nm
Dmax 22.0 nm

SASDNR2 – Experimental SAXS data for hemoglobin conjucted with two copies of PEG dimer (Hb2)

Human hemoglobin conjugated with two copies of 5-kDa PEG experimental SAS data
GASBOR model
Sample: Human hemoglobin conjugated with two copies of 5-kDa PEG dimer, 62 kDa Homo sapiens protein
Buffer: Ringer's lactate solution, pH: 6.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 Feb 19
Solution Structure of Poly(ethylene) Glycol-Conjugated Hemoglobin Revealed by Small-Angle X-Ray Scattering: Implications for a New Oxygen Therapeutic Biophysical Journal 94(1):173-181 (2008)
Svergun D, Ekström F, Vandegriff K, Malavalli A, Baker D, Nilsson C, Winslow R
RgGuinier 2.8 nm
Dmax 13.0 nm

SASDQR2 – Lipid_unpublished_25

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jul 10
Lipid_unpublished_25
Siawosch Schewa

SASDMS2 – HPMA-Based Nanoparticles with Cholesterol (2.7%)

N-(2-hydroxypropyl)- 31 methacrylamide (HPMA) copolymers with Cholesterol (2.7%) experimental SAS data
DAMFILT model
Sample: N-(2-hydroxypropyl)- 31 methacrylamide (HPMA) copolymers with Cholesterol (2.7%) 0, 16740 kDa
Buffer: phosphate buffer saline (PBS) (pH 7.2), pH: 7.2
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Mar 27
Macromolecular HPMA-based nanoparticles with cholesterol for solid-tumor targeting: detailed study of the inner structure of a highly efficient drug delivery system. Biomacromolecules 13(8):2594-604 (2012)
Filippov SK, Chytil P, Konarev PV, Dyakonova M, Papadakis C, Zhigunov A, Plestil J, Stepanek P, Etrych T, Ulbrich K, Svergun DI
RgGuinier 5.2 nm
Dmax 28.1 nm

SASDNS2 – Experimental SAXS data for native hemoglobin (Hb) at concentration c = 5 mg/ml

Hemoglobin subunit alphaHemoglobin subunit beta experimental SAS data
GASBOR model
Sample: Hemoglobin subunit alpha monomer, 15 kDa Homo sapiens protein
Hemoglobin subunit beta monomer, 16 kDa Homo sapiens protein
Buffer: Ringer's lactate solution, pH: 6.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 Feb 19
Solution Structure of Poly(ethylene) Glycol-Conjugated Hemoglobin Revealed by Small-Angle X-Ray Scattering: Implications for a New Oxygen Therapeutic Biophysical Journal 94(1):173-181 (2008)
Svergun D, Ekström F, Vandegriff K, Malavalli A, Baker D, Nilsson C, Winslow R
RgGuinier 2.4 nm
Dmax 13.0 nm

SASDQS2 – Lipid_unpublished_26

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2010 Jul 10
Lipid_unpublished_26
Siawosch Schewa

SASDMT2 – HPMA-Based Nanoparticles with Cholesterol (3.0%)

N-(2-hydroxypropyl)- 31 methacrylamide (HPMA) copolymers with Cholesterol (3.0%) experimental SAS data
DAMFILT model
Sample: N-(2-hydroxypropyl)- 31 methacrylamide (HPMA) copolymers with Cholesterol (3.0%) 0, 29520 kDa
Buffer: phosphate buffer saline (PBS) (pH 5.0), pH: 5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Mar 27
Macromolecular HPMA-based nanoparticles with cholesterol for solid-tumor targeting: detailed study of the inner structure of a highly efficient drug delivery system. Biomacromolecules 13(8):2594-604 (2012)
Filippov SK, Chytil P, Konarev PV, Dyakonova M, Papadakis C, Zhigunov A, Plestil J, Stepanek P, Etrych T, Ulbrich K, Svergun DI
RgGuinier 9.4 nm
Dmax 43.2 nm

SASDNT2 – Experimental SAXS data for native hemoglobin (Hb) at concentration c = 31.25 mg/ml

Hemoglobin subunit alphaHemoglobin subunit beta experimental SAS data
Hemoglobin subunit alpha Hemoglobin subunit beta Kratky plot
Sample: Hemoglobin subunit alpha monomer, 15 kDa Homo sapiens protein
Hemoglobin subunit beta monomer, 16 kDa Homo sapiens protein
Buffer: Ringer's lactate solution, pH: 6.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 Feb 19
Solution Structure of Poly(ethylene) Glycol-Conjugated Hemoglobin Revealed by Small-Angle X-Ray Scattering: Implications for a New Oxygen Therapeutic Biophysical Journal 94(1):173-181 (2008)
Svergun D, Ekström F, Vandegriff K, Malavalli A, Baker D, Nilsson C, Winslow R
RgGuinier 2.2 nm

SASDQT2 – Lipid_unpublished_27

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Dec 17
Lipid_unpublished_27
Siawosch Schewa

SASDMU2 – Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - 5α-cholestan-3-one) without Dox

Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - 5α-cholestan-3-one) without Dox experimental SAS data
DAMMIF model
Sample: Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - 5α-cholestan-3-one) without Dox monomer, 125 kDa
Buffer: phosphate buffer saline (PBS) (pH 5.0), pH: 5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Aug 19
Hydrolytically degradable polymer micelles for drug delivery: a SAXS/SANS kinetic study. Biomacromolecules 14(11):4061-70 (2013)
Filippov SK, Franklin JM, Konarev PV, Chytil P, Etrych T, Bogomolova A, Dyakonova M, Papadakis CM, Radulescu A, Ulbrich K, Stepanek P, Svergun DI
RgGuinier 6.1 nm
Dmax 20.5 nm

SASDNU2 – Homodimerization of a membrane type 1 matrix metalloproteinase (MT1-MMP)

HemopexinHemopexin experimental SAS data
CUSTOM IN-HOUSE model
Sample: Hemopexin monomer, 23 kDa Homo sapiens protein
Hemopexin dimer, 46 kDa Homo sapiens protein
Buffer: 50 mM HEPES, 150 mM NaCl, 10 mM CaCl2, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 Nov 25
The Dimer Interface of the Membrane Type 1 Matrix Metalloproteinase Hemopexin Domain Journal of Biological Chemistry 286(9):7587-7600 (2011)
Tochowicz A, Goettig P, Evans R, Visse R, Shitomi Y, Palmisano R, Ito N, Richter K, Maskos K, Franke D, Svergun D, Nagase H, Bode W, Itoh Y
RgGuinier 2.3 nm
Dmax 8.0 nm
VolumePorod 48 nm3

SASDQU2 – Lipid_unpublished_28

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Dec 17
Lipid_unpublished_28
Siawosch Schewa

SASDMV2 – Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - 5α-cholestan-3-one) with Dox

Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - 5α-cholestan-3-one) with Dox (10%) experimental SAS data
DAMMIF model
Sample: Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - 5α-cholestan-3-one) with Dox (10%) monomer, 220 kDa
Buffer: phosphate buffer saline (PBS) (pH 5.0), pH: 5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Aug 19
Hydrolytically degradable polymer micelles for drug delivery: a SAXS/SANS kinetic study. Biomacromolecules 14(11):4061-70 (2013)
Filippov SK, Franklin JM, Konarev PV, Chytil P, Etrych T, Bogomolova A, Dyakonova M, Papadakis CM, Radulescu A, Ulbrich K, Stepanek P, Svergun DI
RgGuinier 7.5 nm
Dmax 25.5 nm

SASDNV2 – The pro-convertase formed by human FB and cobra venom factor (CVF)

Cobra venom factor experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Cobra venom factor monomer, 185 kDa Naja kaouthia protein
Buffer: 10 mM Tris 5 mM MgCl2 10 mM NaCl, pH: 7.4
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2007 Dec 19
Insights into complement convertase formation based on the structure of the factor B-cobra venom factor complex The EMBO Journal 28(16):2469-2478 (2009)
Janssen B, Gomes L, Koning R, Svergun D, Koster A, Fritzinger D, Vogel C, Gros P
RgGuinier 4.6 nm
Dmax 15.0 nm
VolumePorod 384 nm3

SASDQV2 – Lipid_unpublished_29

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Dec 19
Lipid_unpublished_29
Siawosch Schewa

SASDMW2 – Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - Opb-Chol) without Dox

Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - Opb-Chol) without Dox experimental SAS data
DAMMIF model
Sample: Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - Opb-Chol) without Dox monomer, 125 kDa
Buffer: phosphate buffer saline (PBS) (pH 5.0), pH: 5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Aug 19
Hydrolytically degradable polymer micelles for drug delivery: a SAXS/SANS kinetic study. Biomacromolecules 14(11):4061-70 (2013)
Filippov SK, Franklin JM, Konarev PV, Chytil P, Etrych T, Bogomolova A, Dyakonova M, Papadakis CM, Radulescu A, Ulbrich K, Stepanek P, Svergun DI
RgGuinier 6.4 nm
Dmax 22.5 nm

SASDNW2 – Human Anti-TSC Recombinant Antibody (Fab MOR03268)

Fab fragment in complex with small molecule hapten, crystal form-1 experimental SAS data
DAMMIN model
Sample: Fab fragment in complex with small molecule hapten, crystal form-1 monomer, 45 kDa Homo sapiens protein
Buffer: 20 mM Tris–HCl, 50 mM NaCl, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2005 Jul 25
Fab MOR03268 Triggers Absorption Shift of a Diagnostic Dye via Packaging in a Solvent-shielded Fab Dimer Interface Journal of Molecular Biology 377(1):206-219 (2008)
Hillig R, Urlinger S, Fanghänel J, Brocks B, Haenel C, Stark Y, Sülzle D, Svergun D, Baesler S, Malawski G, Moosmayer D, Menrad A, Schirner M, Licha K
RgGuinier 3.0 nm
Dmax 10.0 nm
VolumePorod 71 nm3

SASDQW2 – Lipid_unpublished_30

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2009 Dec 19
Lipid_unpublished_30
Siawosch Schewa

SASDAX2 – Pyruvate decarboxylase (PDC) from Z. mobilis

Pyruvate decarboxylase experimental SAS data
CRYSOL model
Sample: Pyruvate decarboxylase tetramer, 244 kDa Zymomonas mobilis protein
Buffer: 100 mM Sodium Citrate, 17% Glycerol, 22.5% PEG 1500, pH: 6
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 1998 Nov 3
Crystal versus solution structures of thiamine diphosphate-dependent enzymes. J Biol Chem 275(1):297-302 (2000)
Svergun DI, Petoukhov MV, Koch MH, König S
RgGuinier 3.9 nm
Dmax 11.0 nm

SASDMX2 – Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - Opb-Chol) with Dox (10%)

Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - Opb-Chol) with Dox (10%) experimental SAS data
DAMMIF model
Sample: Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - Opb-Chol) with Dox (10%) monomer, 225 kDa
Buffer: phosphate buffer saline (PBS) (pH 5.0), pH: 5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Aug 19
Hydrolytically degradable polymer micelles for drug delivery: a SAXS/SANS kinetic study. Biomacromolecules 14(11):4061-70 (2013)
Filippov SK, Franklin JM, Konarev PV, Chytil P, Etrych T, Bogomolova A, Dyakonova M, Papadakis CM, Radulescu A, Ulbrich K, Stepanek P, Svergun DI
RgGuinier 10.0 nm
Dmax 21.9 nm

SASDNX2 – Human Anti-TSC Recombinant Antibody (Fab MOR03268) bound to TSC ligand

Fab fragment in complex with small molecule hapten, crystal form-1(1S)-1-AMINO-2-(1H-INDOL-3-YL)ETHANOL experimental SAS data
DAMMIN model
Sample: Fab fragment in complex with small molecule hapten, crystal form-1 monomer, 45 kDa Homo sapiens protein
(1S)-1-AMINO-2-(1H-INDOL-3-YL)ETHANOL monomer, 0 kDa
Buffer: 20 mM Tris–HCl, 50 mM NaCl, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2005 Jul 27
Fab MOR03268 Triggers Absorption Shift of a Diagnostic Dye via Packaging in a Solvent-shielded Fab Dimer Interface Journal of Molecular Biology 377(1):206-219 (2008)
Hillig R, Urlinger S, Fanghänel J, Brocks B, Haenel C, Stark Y, Sülzle D, Svergun D, Baesler S, Malawski G, Moosmayer D, Menrad A, Schirner M, Licha K
RgGuinier 4.1 nm
Dmax 16.0 nm
VolumePorod 139 nm3

SASDQX2 – Lipid_unpublished_31

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Dec 19
Lipid_unpublished_31
Siawosch Schewa

SASDMY2 – Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - Lev-Chol) without Dox

Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - Lev-Chol) without Dox experimental SAS data
DAMMIF model
Sample: Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - Lev-Chol) without Dox monomer, 125 kDa
Buffer: phosphate buffer saline (PBS) (pH 5.0), pH: 5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Aug 19
Hydrolytically degradable polymer micelles for drug delivery: a SAXS/SANS kinetic study. Biomacromolecules 14(11):4061-70 (2013)
Filippov SK, Franklin JM, Konarev PV, Chytil P, Etrych T, Bogomolova A, Dyakonova M, Papadakis CM, Radulescu A, Ulbrich K, Stepanek P, Svergun DI
RgGuinier 6.5 nm
Dmax 22.9 nm

SASDNY2 – Human Anti-TSC Recombinant Antibody (Fab MOR03268) with TSC ligand excess

Fab fragment in complex with small molecule hapten, crystal form-1(1S)-1-AMINO-2-(1H-INDOL-3-YL)ETHANOL experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Fab fragment in complex with small molecule hapten, crystal form-1 monomer, 45 kDa Homo sapiens protein
(1S)-1-AMINO-2-(1H-INDOL-3-YL)ETHANOL monomer, 0 kDa
Buffer: 20 mM Tris–HCl, 50 mM NaCl, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2005 Jul 25
Fab MOR03268 Triggers Absorption Shift of a Diagnostic Dye via Packaging in a Solvent-shielded Fab Dimer Interface Journal of Molecular Biology 377(1):206-219 (2008)
Hillig R, Urlinger S, Fanghänel J, Brocks B, Haenel C, Stark Y, Sülzle D, Svergun D, Baesler S, Malawski G, Moosmayer D, Menrad A, Schirner M, Licha K
RgGuinier 3.6 nm
Dmax 15.0 nm
VolumePorod 107 nm3

SASDQY2 – Lipid_unpublished_32

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Dec 19
Lipid_unpublished_32
Siawosch Schewa

SASDMZ2 – Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - Lev-Chol) with Dox (10%)

Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - Lev-Chol) with Dox (10%) experimental SAS data
DAMMIF model
Sample: Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - Lev-Chol) with Dox (10%) monomer, 125 kDa
Buffer: phosphate buffer saline (PBS) (pH 5.0), pH: 5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Aug 19
Hydrolytically degradable polymer micelles for drug delivery: a SAXS/SANS kinetic study. Biomacromolecules 14(11):4061-70 (2013)
Filippov SK, Franklin JM, Konarev PV, Chytil P, Etrych T, Bogomolova A, Dyakonova M, Papadakis CM, Radulescu A, Ulbrich K, Stepanek P, Svergun DI
RgGuinier 6.9 nm
Dmax 23.8 nm

SASDNZ2 – Tetrameric state of soluble endoglin receptor

Endoglin experimental SAS data
DAMMIF model
Sample: Endoglin tetramer, 243 kDa Homo sapiens protein
Buffer: 10 mM Tris–HCl, 50 mM NaCl, pH: 8
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2008 Oct 17
Structural and functional characterization of soluble endoglin receptor Biochemical and Biophysical Research Communications 383(4):386-391 (2009)
Le B, Franke D, Svergun D, Han T, Hwang H, Kim K
RgGuinier 7.6 nm
Dmax 26.0 nm
VolumePorod 434 nm3

SASDQZ2 – Lipid_unpublished_33

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Dec 19
Lipid_unpublished_33
Siawosch Schewa

SASDM23 – Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - cholest-4-en-3-one) without Dox

Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - cholest-4-en-3-one) without Dox experimental SAS data
DAMMIF model
Sample: Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - cholest-4-en-3-one) without Dox monomer, 125 kDa
Buffer: phosphate buffer saline (PBS) (pH 5.0), pH: 5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Aug 16
Hydrolytically degradable polymer micelles for drug delivery: a SAXS/SANS kinetic study. Biomacromolecules 14(11):4061-70 (2013)
Filippov SK, Franklin JM, Konarev PV, Chytil P, Etrych T, Bogomolova A, Dyakonova M, Papadakis CM, Radulescu A, Ulbrich K, Stepanek P, Svergun DI
RgGuinier 5.9 nm
Dmax 19.7 nm

SASDN23 – Homodimeric state of soluble endoglin receptor

Endoglin experimental SAS data
DAMMIF model
Sample: Endoglin dimer, 121 kDa Homo sapiens protein
Buffer: 10 mM Tris–HCl, 50 mM NaCl, pH: 8
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2008 Oct 17
Structural and functional characterization of soluble endoglin receptor Biochemical and Biophysical Research Communications 383(4):386-391 (2009)
Le B, Franke D, Svergun D, Han T, Hwang H, Kim K
RgGuinier 4.7 nm
Dmax 17.0 nm
VolumePorod 173 nm3

SASDQ23 – Lipid_unpublished_34

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Dec 19
Lipid_unpublished_34
Siawosch Schewa

SASDM33 – Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - cholest-4-en-3-one) with Dox (10%)

Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - cholest-4-en-3-one) with Dox (10%) experimental SAS data
DAMMIF model
Sample: Hydrolytically Degradable Polymer Micelles for Drug Delivery (structure of hydrophobic substituent - cholest-4-en-3-one) with Dox (10%) monomer, 125 kDa
Buffer: phosphate buffer saline (PBS) (pH 5.0), pH: 5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2012 Aug 19
Hydrolytically degradable polymer micelles for drug delivery: a SAXS/SANS kinetic study. Biomacromolecules 14(11):4061-70 (2013)
Filippov SK, Franklin JM, Konarev PV, Chytil P, Etrych T, Bogomolova A, Dyakonova M, Papadakis CM, Radulescu A, Ulbrich K, Stepanek P, Svergun DI
RgGuinier 5.5 nm
Dmax 18.3 nm

SASDN33 – Ternary Human Pex5p(C-terminal)-Pex14p(N)-PTS1 Complex (1:1:1 stoichiometry)

Peroxisomal targeting signal 1 receptor (C -terminal)Peroxisomal membrane protein PEX14 (N-terminal)PTS1-BP experimental SAS data
DAMMIN model
Sample: Peroxisomal targeting signal 1 receptor (C -terminal) monomer, 48 kDa Homo sapiens protein
Peroxisomal membrane protein PEX14 (N-terminal) monomer, 7 kDa Homo sapiens protein
PTS1-BP monomer, 14 kDa Homo sapiens protein
Buffer: 50 mM HEPES-KOH (pH 7.5), 100mM KCl, and 20mM TCEP, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2005 Oct 3
Solution structure of human Pex5.Pex14.PTS1 protein complexes obtained by small angle X-ray scattering. J Biol Chem 284(37):25334-42 (2009)
Shiozawa K, Konarev PV, Neufeld C, Wilmanns M, Svergun DI
RgGuinier 2.9 nm
Dmax 9.0 nm
VolumePorod 110 nm3

SASDQ33 – Lipid_unpublished_36

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Dec 18
Lipid_unpublished_36
Siawosch Schewa

SASDN43 – Full-length Human Pex5p protein

Peroxisomal targeting signal 1 receptor experimental SAS data
DAMMIN model
Sample: Peroxisomal targeting signal 1 receptor monomer, 71 kDa Homo sapiens protein
Buffer: 50 mM HEPES-KOH (pH 7.5), 100mM KCl, and 20mM TCEP, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 Feb 24
Solution structure of human Pex5.Pex14.PTS1 protein complexes obtained by small angle X-ray scattering. J Biol Chem 284(37):25334-42 (2009)
Shiozawa K, Konarev PV, Neufeld C, Wilmanns M, Svergun DI
RgGuinier 5.0 nm
Dmax 20.0 nm
VolumePorod 181 nm3

SASDQ43 – Lipid_unpublished_35

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Dec 18
Lipid_unpublished_35
Siawosch Schewa

SASDN53 – Ternary Human Pex5p(full-length)-Pex14p(N)-PTS1 Protein Complex (1:7:1 stoichiometry)

Peroxisomal targeting signal 1 receptorPeroxisomal membrane protein PEX14PTS1-BP experimental SAS data
SASREF model
Sample: Peroxisomal targeting signal 1 receptor monomer, 71 kDa Homo sapiens protein
Peroxisomal membrane protein PEX14 monomer, 7 kDa Homo sapiens protein
PTS1-BP monomer, 13 kDa Homo sapiens protein
Buffer: 50 mM HEPES-KOH (pH 7.5), 100mM KCl, and 20mM TCEP, pH: 7.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 Mar 18
Solution structure of human Pex5.Pex14.PTS1 protein complexes obtained by small angle X-ray scattering. J Biol Chem 284(37):25334-42 (2009)
Shiozawa K, Konarev PV, Neufeld C, Wilmanns M, Svergun DI
RgGuinier 6.0 nm
Dmax 20.0 nm
VolumePorod 267 nm3

SASDQ53 – Lipid_unpublished_37

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Dec 18
Lipid_unpublished_37
Siawosch Schewa

SASDN63 – Microtubule affinity regulating kinase (isoform MARK2, T208E point mutant)

Serine/threonine-protein kinase MARK2 experimental SAS data
CUSTOM IN-HOUSE model
Sample: Serine/threonine-protein kinase MARK2 monomer, 36 kDa Homo sapiens protein
Buffer: 0.1 M Bis-Tris, 0.2 M ammonium citrate, 1mM DTT, pH: 6.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 May 16
Structural Variations in the Catalytic and Ubiquitin-associated Domains of Microtubule-associated Protein/Microtubule Affinity Regulating Kinase (MARK) 1 and MARK2 Journal of Biological Chemistry 281(37):27586-27599 (2006)
Marx A, Nugoor C, Müller J, Panneerselvam S, Timm T, Bilang M, Mylonas E, Svergun D, Mandelkow E, Mandelkow E
RgGuinier 2.4 nm
Dmax 8.0 nm
VolumePorod 61 nm3

SASDQ63 – Lipid_unpublished_38

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Dec 19
Lipid_unpublished_38
Siawosch Schewa

SASDM73 – Native tannin macromolecules (DP7, average polymerization 6.3) in water-ethanol solution (water fraction 0%)

Native tannin macromolecules (DP7, average polymerization 6.3) in water-ethanol solution (water fraction 0%) experimental SAS data
DAMMIN model
Sample: Native tannin macromolecules (DP7, average polymerization 6.3) in water-ethanol solution (water fraction 0%) heptamer, 2 kDa
Buffer: water-ethanol solution (water fraction 0%), pH: 7
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2007 Nov 24
Rigidity, conformation, and solvation of native and oxidized tannin macromolecules in water-ethanol solution. J Chem Phys 130(24):245103 (2009)
Zanchi D, Konarev PV, Tribet C, Baron A, Svergun DI, Guyot S
RgGuinier 1.0 nm
Dmax 3.5 nm

SASDN73 – Microtubule affinity regulating kinase (isoform MARK2, wild type)

Serine/threonine-protein kinase MARK2 experimental SAS data
CUSTOM IN-HOUSE model
Sample: Serine/threonine-protein kinase MARK2 monomer, 36 kDa Homo sapiens protein
Buffer: 0.1 M Bis-Tris, 0.2 M ammonium citrate, 1mM DTT, pH: 6.5
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2006 May 16
Structural Variations in the Catalytic and Ubiquitin-associated Domains of Microtubule-associated Protein/Microtubule Affinity Regulating Kinase (MARK) 1 and MARK2 Journal of Biological Chemistry 281(37):27586-27599 (2006)
Marx A, Nugoor C, Müller J, Panneerselvam S, Timm T, Bilang M, Mylonas E, Svergun D, Mandelkow E, Mandelkow E
RgGuinier 2.3 nm
Dmax 8.0 nm
VolumePorod 62 nm3

SASDQ73 – Lipid_unpublished_39

Lipid experimental SAS data
Lipid Kratky plot
Sample: Lipid None, lipid
Buffer:
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2011 Dec 20
Lipid_unpublished_39
Siawosch Schewa

SASDM83 – Native tannin macromolecules (DP7, average polymerization 6.3) in water-ethanol solution (water fraction 60%)

Native tannin macromolecules (DP7, average polymerization 6.3) in water-ethanol solution (water fraction 60%) experimental SAS data
DAMMIN model
Sample: Native tannin macromolecules (DP7, average polymerization 6.3) in water-ethanol solution (water fraction 60%) heptamer, 2 kDa
Buffer: water-ethanol solution (water fraction 60%), pH: 7
Experiment: SAXS data collected at ...X33, DORIS III, DESY on 2007 Nov 24
Rigidity, conformation, and solvation of native and oxidized tannin macromolecules in water-ethanol solution. J Chem Phys 130(24):245103 (2009)
Zanchi D, Konarev PV, Tribet C, Baron A, Svergun DI, Guyot S
RgGuinier 1.0 nm
Dmax 3.2 nm